| RVdb StrainID | ANZ00056 | GenBank Accession | ON311239.1 |
| Species | RVA | Sequence Length | 7003 nt |
| Serotype | 23 Checked by RVdb | Serotype (GenBank) | 23 |
| Definition | Rhinovirus A23 strain A23_15 polyprotein gene, complete cds | GenBank Submission Date | 2022-07-19 |
| Strain Name | A23_15 | Sampling Date | 2020-08-25 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 12135 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA031410 | 1A (VP4) | 519 | 725 | 0 | 0 | 207 | |
| SQA031411 | 1B (VP2) | 726 | 1508 | 0 | 0 | 783 | |
| SQA031412 | 1C (VP3) | 1509 | 2216 | 0 | 0 | 708 | |
| SQA031413 | 1D (VP1) | 2217 | 3065 | 0 | 0 | 849 | |
| SQA031414 | 2A (P2-A) | 3066 | 3491 | 0 | 0 | 426 | |
| SQA031415 | 2B (P2-B) | 3492 | 3776 | 0 | 0 | 285 | |
| SQA031416 | 2C (P2-C) | 3777 | 4749 | 0 | 0 | 973 | |
| SQA031417 | 3'UTR | 6969 | 7003 | 0 | 1 | 35 | |
| SQA031418 | 3A (P3-A) | 4750 | 4973 | 0 | 0 | 224 | |
| SQA031419 | 3B (VPg) | 4974 | 5036 | 0 | 0 | 63 | |
| SQA031420 | protease 3C | 5037 | 5585 | 0 | 0 | 549 | |
| SQA031421 | 3D | 5586 | 6965 | 0 | 0 | 1380 | |
| SQA031422 | 5'UTR | 1 | 518 | 1 | 0 | 518 | |
| SQA031423 | CDS | 519 | 6968 | 0 | 0 | 6450 | |
| SQA031424 | VP4/2 | 519 | 953 | 0 | 0 | 435 | |
| SQA031425 | genome | 1 | 7003 | 1 | 1 | 7003 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA029903 | protease 3C | 1507 | 1689 | 0 | 0 | 183 | |
| SPA029904 | 3D | 1690 | 2145 | 0 | 0 | 456 | |
| SPA029905 | 3B (VPg) | 1486 | 1506 | 0 | 0 | 21 | |
| SPA029906 | 3A (P3-A) | 1409 | 1485 | 0 | 0 | 77 | |
| SPA029907 | 2C (P2-C) | 1087 | 1408 | 0 | 0 | 322 | |
| SPA029908 | 2B (P2-B) | 992 | 1086 | 0 | 0 | 95 | |
| SPA029909 | 2A (P2-A) | 850 | 991 | 0 | 0 | 142 | |
| SPA029910 | 1D (VP1) | 567 | 849 | 0 | 0 | 283 | |
| SPA029911 | 1C (VP3) | 331 | 566 | 0 | 0 | 236 | |
| SPA029912 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA029913 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA029914 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA029915 | CDS | 1 | 2149 | 0 | 0 | 2149 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |