| RVdb StrainID | ANZ00041 | GenBank Accession | ON311254.1 |
| Species | RVA | Sequence Length | 7113 nt |
| Serotype | 22 Checked by RVdb | Serotype (GenBank) | 22 |
| Definition | Rhinovirus A22 strain A22_1 polyprotein gene, complete cds | GenBank Submission Date | 2022-07-19 |
| Strain Name | A22_1 | Sampling Date | 2021-04-21 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185896 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA031362 | 1A (VP4) | 590 | 796 | 0 | 0 | 207 | |
| SQA031363 | 1B (VP2) | 797 | 1588 | 0 | 0 | 792 | |
| SQA031364 | 1C (VP3) | 1589 | 2299 | 0 | 0 | 711 | |
| SQA031365 | 1D (VP1) | 2300 | 3166 | 0 | 0 | 867 | |
| SQA031366 | 2A (P2-A) | 3167 | 3592 | 0 | 0 | 426 | |
| SQA031367 | 2B (P2-B) | 3593 | 3877 | 0 | 0 | 285 | |
| SQA031368 | 2C (P2-C) | 3878 | 4843 | 0 | 0 | 966 | |
| SQA031369 | 3'UTR | 7070 | 7113 | 0 | 0 | 44 | |
| SQA031370 | 3A (P3-A) | 4844 | 5074 | 0 | 0 | 231 | |
| SQA031371 | 3B (VPg) | 5075 | 5137 | 0 | 0 | 63 | |
| SQA031372 | protease 3C | 5138 | 5686 | 0 | 0 | 549 | |
| SQA031373 | 3D | 5687 | 7066 | 0 | 0 | 1380 | |
| SQA031374 | 5'UTR | 1 | 589 | 1 | 0 | 589 | |
| SQA031375 | CDS | 590 | 7069 | 0 | 0 | 6480 | |
| SQA031376 | VP4/2 | 590 | 1024 | 0 | 0 | 435 | |
| SQA031377 | genome | 1 | 7113 | 1 | 0 | 7113 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA030098 | protease 3C | 1517 | 1699 | 0 | 0 | 183 | |
| SPA030099 | 3D | 1700 | 2159 | 0 | 0 | 460 | |
| SPA030100 | 3B (VPg) | 1496 | 1516 | 0 | 0 | 21 | |
| SPA030101 | 3A (P3-A) | 1419 | 1495 | 0 | 0 | 77 | |
| SPA030102 | 2C (P2-C) | 1097 | 1418 | 0 | 0 | 322 | |
| SPA030103 | 2B (P2-B) | 1002 | 1096 | 0 | 0 | 95 | |
| SPA030104 | 2A (P2-A) | 860 | 1001 | 0 | 0 | 142 | |
| SPA030105 | 1D (VP1) | 571 | 859 | 0 | 0 | 289 | |
| SPA030106 | 1C (VP3) | 334 | 570 | 0 | 0 | 237 | |
| SPA030107 | 1B (VP2) | 70 | 333 | 0 | 0 | 264 | |
| SPA030108 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA030109 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA030110 | CDS | 1 | 2159 | 0 | 0 | 2159 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |