| RVdb StrainID | ANZ00031 | GenBank Accession | ON311264.1 |
| Species | RVA | Sequence Length | 7147 nt |
| Serotype | 7 Checked by RVdb | Serotype (GenBank) | 7 |
| Definition | Rhinovirus A7 strain A7_1 polyprotein gene, complete cds | GenBank Submission Date | 2022-07-19 |
| Strain Name | A7_1 | Sampling Date | 2021-03-26 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 44136 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA031331 | 1A (VP4) | 617 | 823 | 0 | 0 | 207 | |
| SQA031332 | 1B (VP2) | 824 | 1618 | 0 | 0 | 795 | |
| SQA031333 | 1C (VP3) | 1619 | 2338 | 0 | 0 | 720 | |
| SQA031334 | 1D (VP1) | 2339 | 3211 | 0 | 0 | 873 | |
| SQA031335 | 2A (P2-A) | 3212 | 3637 | 0 | 0 | 426 | |
| SQA031336 | 2B (P2-B) | 3638 | 3922 | 0 | 0 | 285 | |
| SQA031337 | 2C (P2-C) | 3923 | 4885 | 0 | 0 | 963 | |
| SQA031338 | 3'UTR | 7109 | 7147 | 0 | 0 | 39 | |
| SQA031339 | 3A (P3-A) | 4886 | 5113 | 0 | 0 | 228 | |
| SQA031340 | 3B (VPg) | 5114 | 5176 | 0 | 0 | 63 | |
| SQA031341 | protease 3C | 5177 | 5733 | 0 | 0 | 557 | |
| SQA031342 | 3D | 5734 | 7105 | 0 | 0 | 1372 | |
| SQA031343 | 5'UTR | 1 | 616 | 0 | 0 | 616 | |
| SQA031344 | CDS | 617 | 7108 | 0 | 0 | 6492 | |
| SQA031345 | VP4/2 | 617 | 1051 | 0 | 0 | 435 | |
| SQA031346 | genome | 1 | 7147 | 0 | 0 | 7147 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA030226 | protease 3C | 1521 | 1703 | 0 | 0 | 183 | |
| SPA030227 | 3D | 1704 | 2163 | 0 | 0 | 460 | |
| SPA030228 | 3B (VPg) | 1500 | 1520 | 0 | 0 | 21 | |
| SPA030229 | 3A (P3-A) | 1424 | 1499 | 0 | 0 | 76 | |
| SPA030230 | 2C (P2-C) | 1103 | 1423 | 0 | 0 | 321 | |
| SPA030231 | 2B (P2-B) | 1008 | 1102 | 0 | 0 | 95 | |
| SPA030232 | 2A (P2-A) | 867 | 1007 | 0 | 0 | 141 | |
| SPA030233 | 1D (VP1) | 575 | 866 | 0 | 0 | 292 | |
| SPA030234 | 1C (VP3) | 335 | 574 | 0 | 0 | 240 | |
| SPA030235 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA030236 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA030237 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA030238 | CDS | 1 | 2163 | 0 | 0 | 2163 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |