| RVdb StrainID | ANZ00026 | GenBank Accession | ON311269.1 |
| Species | RVA | Sequence Length | 7236 nt |
| Serotype | 34 Checked by RVdb | Serotype (GenBank) | 34 |
| Definition | Rhinovirus A34 strain A34_5 polyprotein gene, complete cds | GenBank Submission Date | 2022-07-19 |
| Strain Name | A34_5 | Sampling Date | 2019-12-26 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185905 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA031315 | 1A (VP4) | 737 | 943 | 0 | 0 | 207 | |
| SQA031316 | 1B (VP2) | 944 | 1720 | 0 | 0 | 777 | |
| SQA031317 | 1C (VP3) | 1721 | 2434 | 0 | 0 | 714 | |
| SQA031318 | 1D (VP1) | 2435 | 3295 | 0 | 0 | 861 | |
| SQA031319 | 2A (P2-A) | 3296 | 3721 | 0 | 0 | 426 | |
| SQA031320 | 2B (P2-B) | 3722 | 4006 | 0 | 0 | 285 | |
| SQA031321 | 2C (P2-C) | 4007 | 4972 | 0 | 0 | 966 | |
| SQA031322 | 3'UTR | 7199 | 7236 | 0 | 1 | 38 | |
| SQA031323 | 3A (P3-A) | 4973 | 5203 | 0 | 0 | 231 | |
| SQA031324 | 3B (VPg) | 5204 | 5266 | 0 | 0 | 63 | |
| SQA031325 | protease 3C | 5267 | 5815 | 0 | 0 | 549 | |
| SQA031326 | 3D | 5816 | 7195 | 0 | 0 | 1380 | |
| SQA031327 | 5'UTR | 1 | 736 | 0 | 0 | 736 | |
| SQA031328 | CDS | 737 | 7198 | 0 | 0 | 6462 | |
| SQA031329 | VP4/2 | 737 | 1171 | 0 | 0 | 435 | |
| SQA031330 | genome | 1 | 7236 | 0 | 1 | 7236 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA030291 | protease 3C | 1511 | 1693 | 0 | 0 | 183 | |
| SPA030292 | 3D | 1694 | 2149 | 0 | 0 | 456 | |
| SPA030293 | 3B (VPg) | 1490 | 1510 | 0 | 0 | 21 | |
| SPA030294 | 3A (P3-A) | 1413 | 1489 | 0 | 0 | 77 | |
| SPA030295 | 2C (P2-C) | 1091 | 1412 | 0 | 0 | 322 | |
| SPA030296 | 2B (P2-B) | 996 | 1090 | 0 | 0 | 95 | |
| SPA030297 | 2A (P2-A) | 854 | 995 | 0 | 0 | 142 | |
| SPA030298 | 1D (VP1) | 567 | 853 | 0 | 0 | 287 | |
| SPA030299 | 1C (VP3) | 329 | 566 | 0 | 0 | 238 | |
| SPA030300 | 1B (VP2) | 70 | 328 | 0 | 0 | 259 | |
| SPA030301 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA030302 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA030303 | CDS | 1 | 2153 | 0 | 0 | 2153 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |