RVdb StrainID ANZ00016 GenBank Accession ON729332.1
Species RVA Sequence Length 6928 nt
Serotype 11  Checked by RVdb Serotype (GenBank) 11
Definition Rhinovirus A11 strain SC330 polyprotein gene, partial cds GenBank Submission Date 2022-07-20
Strain Name SC330 Sampling Date 2017
Sampling Country USA Sampling location Seattle, Washington
Isolation Source -N/A- NCBI Taxon ID 39767
Sequencing Technology -N/A- Assembly Method -N/A-

Download selected NT sequences
SeqID Gene Name Start End StartTruncated EndTruncated Length
SQA031285 1A (VP4) 573 779 0 0 207
SQA031286 1B (VP2) 780 1559 0 0 780
SQA031287 1C (VP3) 1560 2273 0 0 714
SQA031288 1D (VP1) 2274 3131 0 0 858
SQA031289 2A (P2-A) 3132 3557 0 0 426
SQA031290 2B (P2-B) 3558 3842 0 0 285
SQA031291 2C (P2-C) 3843 4808 0 0 966
SQA031292 3A (P3-A) 4809 5039 0 0 231
SQA031293 3B (VPg) 5040 5102 0 0 63
SQA031294 protease 3C 5103 5651 0 0 549
SQA031295 3D 5652 6928 0 1 1277
SQA031296 5'UTR 1 572 1 0 572
SQA031297 CDS 573 6928 0 1 6356
SQA031298 VP4/2 573 1007 0 0 435
Download selected AA sequences
SeqID Gene Name Start End StartTruncated EndTruncated Length
SPA030421 protease 3C 1511 1693 0 0 183
SPA030422 3D 1694 2118 0 1 425
SPA030423 3B (VPg) 1490 1510 0 0 21
SPA030424 3A (P3-A) 1413 1489 0 0 77
SPA030425 2C (P2-C) 1091 1412 0 0 322
SPA030426 2B (P2-B) 996 1090 0 0 95
SPA030427 2A (P2-A) 854 995 0 0 142
SPA030428 1D (VP1) 568 853 0 0 286
SPA030429 1C (VP3) 330 567 0 0 238
SPA030430 1B (VP2) 70 329 0 0 260
SPA030431 1A (VP4) 1 69 0 0 69
SPA030432 VP4/2 1 145 0 0 145
SPA030433 CDS 1 2118 0 0 2118
PMID Title Publication Year Journal View in RVdb
35749582 The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. 2022 J Infect Dis View More