| RVdb StrainID | ANS10138 | GenBank Accession | OP342740.1 |
| Species | RVA | Sequence Length | 7109 nt |
| Serotype | 12 Checked by RVdb | Serotype (GenBank) | 12 |
| Definition | Rhinovirus A12 strain RVA12/China/2014/HBH43 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVA12/China/2014/HBH43 | Sampling Date | 2014-11-01 |
| Sampling Country | China | Sampling location | Hebei |
| Isolation Source | -N/A- | NCBI Taxon ID | 147684 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA040654 | 5'UTR | 1 | 614 | 0 | 0 | 614 | |
| SQA040655 | CDS | 615 | 7085 | 0 | 0 | 6471 | |
| SQA040656 | VP4/2 | 615 | 1049 | 0 | 0 | 435 | |
| SQA040657 | 3D | 5700 | 7082 | 0 | 0 | 1383 | |
| SQA040658 | 2C (P2-C) | 3900 | 4862 | 0 | 0 | 963 | |
| SQA040659 | 1D (VP1) | 2325 | 3185 | 0 | 0 | 861 | |
| SQA040660 | 1B (VP2) | 822 | 1610 | 0 | 0 | 789 | |
| SQA040661 | 1C (VP3) | 1611 | 2324 | 0 | 0 | 714 | |
| SQA040662 | protease 3C | 5157 | 5699 | 0 | 0 | 543 | |
| SQA040663 | 2A (P2-A) | 3186 | 3614 | 0 | 0 | 429 | |
| SQA040664 | 2B (P2-B) | 3615 | 3899 | 0 | 0 | 285 | |
| SQA040665 | 3A (P3-A) | 4863 | 5093 | 0 | 0 | 231 | |
| SQA040666 | 1A (VP4) | 615 | 821 | 0 | 0 | 207 | |
| SQA040667 | 3B (VPg) | 5094 | 5156 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033820 | CDS | 1 | 2156 | 0 | 0 | 2156 | |
| SPA033894 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA034434 | 3D | 1696 | 2156 | 0 | 0 | 461 | |
| SPA034435 | 2C (P2-C) | 1096 | 1416 | 0 | 0 | 321 | |
| SPA034436 | 1D (VP1) | 571 | 857 | 0 | 0 | 287 | |
| SPA034437 | 1B (VP2) | 70 | 332 | 0 | 0 | 263 | |
| SPA034438 | 1C (VP3) | 333 | 570 | 0 | 0 | 238 | |
| SPA034439 | protease 3C | 1515 | 1695 | 0 | 0 | 181 | |
| SPA034440 | 2A (P2-A) | 858 | 1000 | 0 | 0 | 143 | |
| SPA034441 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA034442 | 3A (P3-A) | 1417 | 1493 | 0 | 0 | 77 | |
| SPA034443 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA034444 | 3B (VPg) | 1494 | 1514 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |