| RVdb StrainID | ANS10137 | GenBank Accession | OP342739.1 |
| Species | RVA | Sequence Length | 7161 nt |
| Serotype | 12 Checked by RVdb | Serotype (GenBank) | 12 |
| Definition | Rhinovirus A12 strain RVA12/China/2015/HBH70 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVA12/China/2015/HBH70 | Sampling Date | 2015-06-17 |
| Sampling Country | China | Sampling location | Hebei |
| Isolation Source | -N/A- | NCBI Taxon ID | 147684 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA040639 | 3'UTR | 7087 | 7129 | 0 | 0 | 43 | |
| SQA040640 | 5'UTR | 1 | 615 | 0 | 0 | 615 | |
| SQA040641 | CDS | 616 | 7086 | 0 | 0 | 6471 | |
| SQA040642 | VP4/2 | 616 | 1050 | 0 | 0 | 435 | |
| SQA040643 | 3D | 5701 | 7083 | 0 | 0 | 1383 | |
| SQA040644 | 2C (P2-C) | 3901 | 4863 | 0 | 0 | 963 | |
| SQA040645 | 1D (VP1) | 2326 | 3186 | 0 | 0 | 861 | |
| SQA040646 | 1B (VP2) | 823 | 1611 | 0 | 0 | 789 | |
| SQA040647 | 1C (VP3) | 1612 | 2325 | 0 | 0 | 714 | |
| SQA040648 | protease 3C | 5158 | 5700 | 0 | 0 | 543 | |
| SQA040649 | 2A (P2-A) | 3187 | 3615 | 0 | 0 | 429 | |
| SQA040650 | 2B (P2-B) | 3616 | 3900 | 0 | 0 | 285 | |
| SQA040651 | 3A (P3-A) | 4864 | 5094 | 0 | 0 | 231 | |
| SQA040652 | 1A (VP4) | 616 | 822 | 0 | 0 | 207 | |
| SQA040653 | 3B (VPg) | 5095 | 5157 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033821 | CDS | 1 | 2156 | 0 | 0 | 2156 | |
| SPA033895 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA034445 | 3D | 1696 | 2156 | 0 | 0 | 461 | |
| SPA034446 | 2C (P2-C) | 1096 | 1416 | 0 | 0 | 321 | |
| SPA034447 | 1D (VP1) | 571 | 857 | 0 | 0 | 287 | |
| SPA034448 | 1B (VP2) | 70 | 332 | 0 | 0 | 263 | |
| SPA034449 | 1C (VP3) | 333 | 570 | 0 | 0 | 238 | |
| SPA034450 | protease 3C | 1515 | 1695 | 0 | 0 | 181 | |
| SPA034451 | 2A (P2-A) | 858 | 1000 | 0 | 0 | 143 | |
| SPA034452 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA034453 | 3A (P3-A) | 1417 | 1493 | 0 | 0 | 77 | |
| SPA034454 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA034455 | 3B (VPg) | 1494 | 1514 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |