| RVdb StrainID | ANS10136 | GenBank Accession | OP342738.1 |
| Species | RVA | Sequence Length | 7099 nt |
| Serotype | 12 Checked by RVdb | Serotype (GenBank) | 12 |
| Definition | Rhinovirus A12 strain RVA12/China/2017/BJP66 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVA12/China/2017/BJP66 | Sampling Date | 2017-06-14 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | -N/A- | NCBI Taxon ID | 147684 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA040625 | 5'UTR | 1 | 605 | 0 | 0 | 605 | |
| SQA040626 | CDS | 606 | 7076 | 0 | 0 | 6471 | |
| SQA040627 | VP4/2 | 606 | 1040 | 0 | 0 | 435 | |
| SQA040628 | 3D | 5697 | 7073 | 0 | 0 | 1377 | |
| SQA040629 | 2C (P2-C) | 3891 | 4853 | 0 | 0 | 963 | |
| SQA040630 | 1D (VP1) | 2316 | 3176 | 0 | 0 | 861 | |
| SQA040631 | 1B (VP2) | 813 | 1601 | 0 | 0 | 789 | |
| SQA040632 | 1C (VP3) | 1602 | 2315 | 0 | 0 | 714 | |
| SQA040633 | protease 3C | 5148 | 5696 | 0 | 0 | 549 | |
| SQA040634 | 2A (P2-A) | 3177 | 3605 | 0 | 0 | 429 | |
| SQA040635 | 2B (P2-B) | 3606 | 3890 | 0 | 0 | 285 | |
| SQA040636 | 3A (P3-A) | 4854 | 5084 | 0 | 0 | 231 | |
| SQA040637 | 1A (VP4) | 606 | 812 | 0 | 0 | 207 | |
| SQA040638 | 3B (VPg) | 5085 | 5147 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033822 | CDS | 1 | 2156 | 0 | 0 | 2156 | |
| SPA033896 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA034456 | 3D | 1698 | 2156 | 0 | 0 | 459 | |
| SPA034457 | 2C (P2-C) | 1096 | 1416 | 0 | 0 | 321 | |
| SPA034458 | 1D (VP1) | 571 | 857 | 0 | 0 | 287 | |
| SPA034459 | 1B (VP2) | 70 | 332 | 0 | 0 | 263 | |
| SPA034460 | 1C (VP3) | 333 | 570 | 0 | 0 | 238 | |
| SPA034461 | protease 3C | 1515 | 1697 | 0 | 0 | 183 | |
| SPA034462 | 2A (P2-A) | 858 | 1000 | 0 | 0 | 143 | |
| SPA034463 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA034464 | 3A (P3-A) | 1417 | 1493 | 0 | 0 | 77 | |
| SPA034465 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA034466 | 3B (VPg) | 1494 | 1514 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |