| RVdb StrainID | ANS10127 | GenBank Accession | OP342729.1 |
| Species | RVA | Sequence Length | 7137 nt |
| Serotype | 38 Checked by RVdb | Serotype (GenBank) | 38 |
| Definition | Rhinovirus A38 strain RVA38/China/2017/BJP45 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVA38/China/2017/BJP45 | Sampling Date | 2017-05-12 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | -N/A- | NCBI Taxon ID | 185906 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA040493 | 3'UTR | 7090 | 7135 | 0 | 0 | 46 | |
| SQA040494 | 5'UTR | 1 | 609 | 0 | 0 | 609 | |
| SQA040495 | CDS | 610 | 7089 | 0 | 0 | 6480 | |
| SQA040496 | VP4/2 | 610 | 1044 | 0 | 0 | 435 | |
| SQA040497 | 3D | 5707 | 7086 | 0 | 0 | 1380 | |
| SQA040498 | 2C (P2-C) | 3898 | 4863 | 0 | 0 | 966 | |
| SQA040499 | 1D (VP1) | 2317 | 3186 | 0 | 0 | 870 | |
| SQA040500 | 1C (VP3) | 1522 | 2316 | 0 | 0 | 795 | |
| SQA040501 | 1B (VP2) | 817 | 1521 | 0 | 0 | 705 | |
| SQA040502 | protease 3C | 5158 | 5706 | 0 | 0 | 549 | |
| SQA040503 | 2A (P2-A) | 3187 | 3612 | 0 | 0 | 426 | |
| SQA040504 | 2B (P2-B) | 3613 | 3897 | 0 | 0 | 285 | |
| SQA040505 | 3A (P3-A) | 4864 | 5094 | 0 | 0 | 231 | |
| SQA040506 | 1A (VP4) | 610 | 816 | 0 | 0 | 207 | |
| SQA040507 | 3B (VPg) | 5095 | 5157 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033804 | CDS | 1 | 2159 | 0 | 0 | 2159 | |
| SPA033878 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA034258 | 3D | 1700 | 2159 | 0 | 0 | 460 | |
| SPA034259 | 2C (P2-C) | 1097 | 1418 | 0 | 0 | 322 | |
| SPA034260 | 1D (VP1) | 570 | 859 | 0 | 0 | 290 | |
| SPA034261 | 1C (VP3) | 305 | 569 | 0 | 0 | 265 | |
| SPA034262 | 1B (VP2) | 70 | 304 | 0 | 0 | 235 | |
| SPA034263 | protease 3C | 1517 | 1699 | 0 | 0 | 183 | |
| SPA034264 | 2A (P2-A) | 860 | 1001 | 0 | 0 | 142 | |
| SPA034265 | 2B (P2-B) | 1002 | 1096 | 0 | 0 | 95 | |
| SPA034266 | 3A (P3-A) | 1419 | 1495 | 0 | 0 | 77 | |
| SPA034267 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA034268 | 3B (VPg) | 1496 | 1516 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |