| RVdb StrainID | ANS10126 | GenBank Accession | OP342728.1 |
| Species | RVA | Sequence Length | 7108 nt |
| Serotype | 45 Checked by RVdb | Serotype (GenBank) | 45 |
| Definition | Rhinovirus A45 strain RVA45/China/2018/BJR108 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVA45/China/2018/BJR108 | Sampling Date | 2018-02-09 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | -N/A- | NCBI Taxon ID | 147676 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA040478 | 3'UTR | 7074 | 7108 | 0 | 1 | 35 | |
| SQA040479 | 5'UTR | 1 | 614 | 0 | 0 | 614 | |
| SQA040480 | CDS | 615 | 7073 | 0 | 0 | 6459 | |
| SQA040481 | VP4/2 | 615 | 1049 | 0 | 0 | 435 | |
| SQA040482 | 3D | 5691 | 7070 | 0 | 0 | 1380 | |
| SQA040483 | 2C (P2-C) | 3885 | 4847 | 0 | 0 | 963 | |
| SQA040484 | 1D (VP1) | 2316 | 3164 | 0 | 0 | 849 | |
| SQA040485 | 1B (VP2) | 822 | 1601 | 0 | 0 | 780 | |
| SQA040486 | 1C (VP3) | 1602 | 2315 | 0 | 0 | 714 | |
| SQA040487 | protease 3C | 5142 | 5690 | 0 | 0 | 549 | |
| SQA040488 | 2A (P2-A) | 3165 | 3599 | 0 | 0 | 435 | |
| SQA040489 | 2B (P2-B) | 3600 | 3884 | 0 | 0 | 285 | |
| SQA040490 | 3A (P3-A) | 4848 | 5078 | 0 | 0 | 231 | |
| SQA040491 | 1A (VP4) | 615 | 821 | 0 | 0 | 207 | |
| SQA040492 | 3B (VPg) | 5079 | 5141 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033832 | CDS | 1 | 2152 | 0 | 0 | 2152 | |
| SPA033906 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA034566 | 3D | 1693 | 2152 | 0 | 0 | 460 | |
| SPA034567 | 2C (P2-C) | 1091 | 1411 | 0 | 0 | 321 | |
| SPA034568 | 1D (VP1) | 568 | 850 | 0 | 0 | 283 | |
| SPA034569 | 1B (VP2) | 70 | 329 | 0 | 0 | 260 | |
| SPA034570 | 1C (VP3) | 330 | 567 | 0 | 0 | 238 | |
| SPA034571 | protease 3C | 1510 | 1692 | 0 | 0 | 183 | |
| SPA034572 | 2A (P2-A) | 851 | 995 | 0 | 0 | 145 | |
| SPA034573 | 2B (P2-B) | 996 | 1090 | 0 | 0 | 95 | |
| SPA034574 | 3A (P3-A) | 1412 | 1488 | 0 | 0 | 77 | |
| SPA034575 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA034576 | 3B (VPg) | 1489 | 1509 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |