| RVdb StrainID | ANS10123 | GenBank Accession | OP342725.1 |
| Species | RVA | Sequence Length | 7156 nt |
| Serotype | 51 Checked by RVdb | Serotype (GenBank) | 51 |
| Definition | Rhinovirus A51 strain RVA51/China/2018/BJR109 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVA51/China/2018/BJR109 | Sampling Date | 2018-02-09 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | -N/A- | NCBI Taxon ID | 185912 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA040433 | 3'UTR | 7123 | 7156 | 0 | 1 | 34 | |
| SQA040434 | 5'UTR | 1 | 621 | 0 | 0 | 621 | |
| SQA040435 | CDS | 622 | 7122 | 0 | 0 | 6501 | |
| SQA040436 | VP4/2 | 622 | 1056 | 0 | 0 | 435 | |
| SQA040437 | 3D | 5743 | 7119 | 0 | 0 | 1377 | |
| SQA040438 | 2C (P2-C) | 3934 | 4896 | 0 | 0 | 963 | |
| SQA040439 | 1D (VP1) | 2332 | 3219 | 0 | 0 | 888 | |
| SQA040440 | 1B (VP2) | 829 | 1617 | 0 | 0 | 789 | |
| SQA040441 | 1C (VP3) | 1618 | 2331 | 0 | 0 | 714 | |
| SQA040442 | protease 3C | 5194 | 5742 | 0 | 0 | 549 | |
| SQA040443 | 2A (P2-A) | 3220 | 3648 | 0 | 0 | 429 | |
| SQA040444 | 2B (P2-B) | 3649 | 3933 | 0 | 0 | 285 | |
| SQA040445 | 3A (P3-A) | 4897 | 5130 | 0 | 0 | 234 | |
| SQA040446 | 1A (VP4) | 622 | 828 | 0 | 0 | 207 | |
| SQA040447 | 3B (VPg) | 5131 | 5193 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033776 | CDS | 1 | 2166 | 0 | 0 | 2166 | |
| SPA033850 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA033950 | 3D | 1708 | 2166 | 0 | 0 | 459 | |
| SPA033951 | 2C (P2-C) | 1105 | 1425 | 0 | 0 | 321 | |
| SPA033952 | 1D (VP1) | 571 | 866 | 0 | 0 | 296 | |
| SPA033953 | 1B (VP2) | 70 | 332 | 0 | 0 | 263 | |
| SPA033954 | 1C (VP3) | 333 | 570 | 0 | 0 | 238 | |
| SPA033955 | protease 3C | 1525 | 1707 | 0 | 0 | 183 | |
| SPA033956 | 2A (P2-A) | 867 | 1009 | 0 | 0 | 143 | |
| SPA033957 | 2B (P2-B) | 1010 | 1104 | 0 | 0 | 95 | |
| SPA033958 | 3A (P3-A) | 1426 | 1503 | 0 | 0 | 78 | |
| SPA033959 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA033960 | 3B (VPg) | 1504 | 1524 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |