| RVdb StrainID | ANS10122 | GenBank Accession | OP342724.1 |
| Species | RVA | Sequence Length | 7123 nt |
| Serotype | 53 Checked by RVdb | Serotype (GenBank) | 53 |
| Definition | Rhinovirus A53 strain RVA53/China/2018/BJR26 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVA53/China/2018/BJR26 | Sampling Date | 2018-01-30 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | -N/A- | NCBI Taxon ID | 185913 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA040419 | 5'UTR | 1 | 612 | 0 | 0 | 612 | |
| SQA040420 | CDS | 613 | 7101 | 0 | 0 | 6489 | |
| SQA040421 | VP4/2 | 613 | 1047 | 0 | 0 | 435 | |
| SQA040422 | 3D | 5722 | 7098 | 0 | 0 | 1377 | |
| SQA040423 | 2C (P2-C) | 3913 | 4875 | 0 | 0 | 963 | |
| SQA040424 | 1D (VP1) | 2323 | 3198 | 0 | 0 | 876 | |
| SQA040425 | 1B (VP2) | 820 | 1608 | 0 | 0 | 789 | |
| SQA040426 | 1C (VP3) | 1609 | 2322 | 0 | 0 | 714 | |
| SQA040427 | protease 3C | 5173 | 5721 | 0 | 0 | 549 | |
| SQA040428 | 2A (P2-A) | 3199 | 3627 | 0 | 0 | 429 | |
| SQA040429 | 2B (P2-B) | 3628 | 3912 | 0 | 0 | 285 | |
| SQA040430 | 3A (P3-A) | 4876 | 5109 | 0 | 0 | 234 | |
| SQA040431 | 1A (VP4) | 613 | 819 | 0 | 0 | 207 | |
| SQA040432 | 3B (VPg) | 5110 | 5172 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033792 | CDS | 1 | 2162 | 0 | 0 | 2162 | |
| SPA033866 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA034126 | 3D | 1704 | 2162 | 0 | 0 | 459 | |
| SPA034127 | 2C (P2-C) | 1101 | 1421 | 0 | 0 | 321 | |
| SPA034128 | 1D (VP1) | 571 | 862 | 0 | 0 | 292 | |
| SPA034129 | 1B (VP2) | 70 | 332 | 0 | 0 | 263 | |
| SPA034130 | 1C (VP3) | 333 | 570 | 0 | 0 | 238 | |
| SPA034131 | protease 3C | 1521 | 1703 | 0 | 0 | 183 | |
| SPA034132 | 2A (P2-A) | 863 | 1005 | 0 | 0 | 143 | |
| SPA034133 | 2B (P2-B) | 1006 | 1100 | 0 | 0 | 95 | |
| SPA034134 | 3A (P3-A) | 1422 | 1499 | 0 | 0 | 78 | |
| SPA034135 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA034136 | 3B (VPg) | 1500 | 1520 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |