| RVdb StrainID | ANS10121 | GenBank Accession | OP342723.1 |
| Species | RVA | Sequence Length | 7129 nt |
| Serotype | 54 Checked by RVdb | Serotype (GenBank) | 54 |
| Definition | Rhinovirus A54 strain RVA54/China/2017/BJR7 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVA54/China/2017/BJR7 | Sampling Date | 2017-01-29 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | -N/A- | NCBI Taxon ID | 185914 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA040404 | 3'UTR | 7088 | 7129 | 0 | 0 | 42 | |
| SQA040405 | 5'UTR | 1 | 610 | 0 | 0 | 610 | |
| SQA040406 | CDS | 611 | 7087 | 0 | 0 | 6477 | |
| SQA040407 | VP4/2 | 611 | 1045 | 0 | 0 | 435 | |
| SQA040408 | 3D | 5705 | 7084 | 0 | 0 | 1380 | |
| SQA040409 | 2C (P2-C) | 3896 | 4861 | 0 | 0 | 966 | |
| SQA040410 | 1D (VP1) | 2327 | 3184 | 0 | 0 | 858 | |
| SQA040411 | 1B (VP2) | 818 | 1612 | 0 | 0 | 795 | |
| SQA040412 | 1C (VP3) | 1613 | 2326 | 0 | 0 | 714 | |
| SQA040413 | protease 3C | 5156 | 5704 | 0 | 0 | 549 | |
| SQA040414 | 2A (P2-A) | 3185 | 3610 | 0 | 0 | 426 | |
| SQA040415 | 2B (P2-B) | 3611 | 3895 | 0 | 0 | 285 | |
| SQA040416 | 3A (P3-A) | 4862 | 5092 | 0 | 0 | 231 | |
| SQA040417 | 1A (VP4) | 611 | 817 | 0 | 0 | 207 | |
| SQA040418 | 3B (VPg) | 5093 | 5155 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033811 | CDS | 1 | 2158 | 0 | 0 | 2158 | |
| SPA033885 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA034335 | 3D | 1699 | 2158 | 0 | 0 | 460 | |
| SPA034336 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA034337 | 1D (VP1) | 573 | 858 | 0 | 0 | 286 | |
| SPA034338 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA034339 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA034340 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA034341 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA034342 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA034343 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA034344 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA034345 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |