| RVdb StrainID | ANS10117 | GenBank Accession | OP342719.1 |
| Species | RVA | Sequence Length | 7042 nt |
| Serotype | 56 Checked by RVdb | Serotype (GenBank) | 56 |
| Definition | Rhinovirus A56 strain RVA56/China/2014/HBH33 polyprotein gene, partial cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVA56/China/2014/HBH33 | Sampling Date | 2014-06-10 |
| Sampling Country | China | Sampling location | Hebei |
| Isolation Source | -N/A- | NCBI Taxon ID | 185916 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA040346 | 5'UTR | 1 | 613 | 0 | 0 | 613 | |
| SQA040347 | CDS | 614 | 7042 | 0 | 1 | 6429 | |
| SQA040348 | VP4/2 | 614 | 1048 | 0 | 0 | 435 | |
| SQA040349 | 3D | 5708 | 7042 | 0 | 1 | 1335 | |
| SQA040350 | 2C (P2-C) | 3899 | 4864 | 0 | 0 | 966 | |
| SQA040351 | 1D (VP1) | 2330 | 3184 | 0 | 0 | 855 | |
| SQA040352 | 1B (VP2) | 821 | 1615 | 0 | 0 | 795 | |
| SQA040353 | 1C (VP3) | 1616 | 2329 | 0 | 0 | 714 | |
| SQA040354 | protease 3C | 5159 | 5707 | 0 | 0 | 549 | |
| SQA040355 | 2A (P2-A) | 3185 | 3613 | 0 | 0 | 429 | |
| SQA040356 | 2B (P2-B) | 3614 | 3898 | 0 | 0 | 285 | |
| SQA040357 | 3A (P3-A) | 4865 | 5095 | 0 | 0 | 231 | |
| SQA040358 | 1A (VP4) | 614 | 820 | 0 | 0 | 207 | |
| SQA040359 | 3B (VPg) | 5096 | 5158 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033842 | CDS | 1 | 2143 | 0 | 0 | 2143 | |
| SPA033916 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA034676 | 3D | 1699 | 2143 | 0 | 1 | 445 | |
| SPA034677 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA034678 | 1D (VP1) | 573 | 857 | 0 | 0 | 285 | |
| SPA034679 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA034680 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA034681 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA034682 | 2A (P2-A) | 858 | 1000 | 0 | 0 | 143 | |
| SPA034683 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA034684 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA034685 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA034686 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |