| RVdb StrainID | ANS10115 | GenBank Accession | OP342717.1 |
| Species | RVA | Sequence Length | 7077 nt |
| Serotype | 60 Checked by RVdb | Serotype (GenBank) | 60 |
| Definition | Rhinovirus A60 strain RVA60/China/2018/BJR68 polyprotein gene, partial cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVA60/China/2018/BJR68 | Sampling Date | 2018-02-05 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | -N/A- | NCBI Taxon ID | 185919 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA040317 | 5'UTR | 1 | 612 | 0 | 0 | 612 | |
| SQA040318 | CDS | 613 | 7077 | 0 | 1 | 6465 | |
| SQA040319 | VP4/2 | 613 | 1047 | 0 | 0 | 435 | |
| SQA040320 | 3D | 5710 | 7077 | 0 | 1 | 1368 | |
| SQA040321 | 2C (P2-C) | 3901 | 4866 | 0 | 0 | 966 | |
| SQA040322 | 1D (VP1) | 2320 | 3189 | 0 | 0 | 870 | |
| SQA040323 | 1B (VP2) | 820 | 1605 | 0 | 0 | 786 | |
| SQA040324 | 1C (VP3) | 1606 | 2319 | 0 | 0 | 714 | |
| SQA040325 | protease 3C | 5161 | 5709 | 0 | 0 | 549 | |
| SQA040326 | 2A (P2-A) | 3190 | 3615 | 0 | 0 | 426 | |
| SQA040327 | 2B (P2-B) | 3616 | 3900 | 0 | 0 | 285 | |
| SQA040328 | 3A (P3-A) | 4867 | 5097 | 0 | 0 | 231 | |
| SQA040329 | 1A (VP4) | 613 | 819 | 0 | 0 | 207 | |
| SQA040330 | 3B (VPg) | 5098 | 5160 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033827 | CDS | 1 | 2155 | 0 | 0 | 2155 | |
| SPA033901 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA034511 | 3D | 1700 | 2155 | 0 | 1 | 456 | |
| SPA034512 | 2C (P2-C) | 1097 | 1418 | 0 | 0 | 322 | |
| SPA034513 | 1D (VP1) | 570 | 859 | 0 | 0 | 290 | |
| SPA034514 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA034515 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA034516 | protease 3C | 1517 | 1699 | 0 | 0 | 183 | |
| SPA034517 | 2A (P2-A) | 860 | 1001 | 0 | 0 | 142 | |
| SPA034518 | 2B (P2-B) | 1002 | 1096 | 0 | 0 | 95 | |
| SPA034519 | 3A (P3-A) | 1419 | 1495 | 0 | 0 | 77 | |
| SPA034520 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA034521 | 3B (VPg) | 1496 | 1516 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |