| RVdb StrainID | ANS10111 | GenBank Accession | OP342713.1 |
| Species | RVA | Sequence Length | 7139 nt |
| Serotype | 80 Checked by RVdb | Serotype (GenBank) | 80 |
| Definition | Rhinovirus A80 strain RVA80/China/2015/HBH68 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVA80/China/2015/HBH68 | Sampling Date | 2015-05-18 |
| Sampling Country | China | Sampling location | Hebei |
| Isolation Source | -N/A- | NCBI Taxon ID | 185934 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA040258 | 3'UTR | 7100 | 7139 | 0 | 0 | 40 | |
| SQA040259 | 5'UTR | 1 | 616 | 0 | 0 | 616 | |
| SQA040260 | CDS | 617 | 7099 | 0 | 0 | 6483 | |
| SQA040261 | VP4/2 | 617 | 1051 | 0 | 0 | 435 | |
| SQA040262 | 3D | 5720 | 7096 | 0 | 0 | 1377 | |
| SQA040263 | 2C (P2-C) | 3914 | 4876 | 0 | 0 | 963 | |
| SQA040264 | 1D (VP1) | 2324 | 3199 | 0 | 0 | 876 | |
| SQA040265 | 1B (VP2) | 824 | 1609 | 0 | 0 | 786 | |
| SQA040266 | 1C (VP3) | 1610 | 2323 | 0 | 0 | 714 | |
| SQA040267 | protease 3C | 5171 | 5719 | 0 | 0 | 549 | |
| SQA040268 | 2A (P2-A) | 3200 | 3628 | 0 | 0 | 429 | |
| SQA040269 | 2B (P2-B) | 3629 | 3913 | 0 | 0 | 285 | |
| SQA040270 | 3A (P3-A) | 4877 | 5107 | 0 | 0 | 231 | |
| SQA040271 | 1A (VP4) | 617 | 823 | 0 | 0 | 207 | |
| SQA040272 | 3B (VPg) | 5108 | 5170 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033799 | CDS | 1 | 2160 | 0 | 0 | 2160 | |
| SPA033873 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA034203 | 3D | 1702 | 2160 | 0 | 0 | 459 | |
| SPA034204 | 2C (P2-C) | 1100 | 1420 | 0 | 0 | 321 | |
| SPA034205 | 1D (VP1) | 570 | 861 | 0 | 0 | 292 | |
| SPA034206 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA034207 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA034208 | protease 3C | 1519 | 1701 | 0 | 0 | 183 | |
| SPA034209 | 2A (P2-A) | 862 | 1004 | 0 | 0 | 143 | |
| SPA034210 | 2B (P2-B) | 1005 | 1099 | 0 | 0 | 95 | |
| SPA034211 | 3A (P3-A) | 1421 | 1497 | 0 | 0 | 77 | |
| SPA034212 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA034213 | 3B (VPg) | 1498 | 1518 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |