| RVdb StrainID | ANS10109 | GenBank Accession | OP342711.1 |
| Species | RVA | Sequence Length | 7126 nt |
| Serotype | 89 Checked by RVdb | Serotype (GenBank) | 89 |
| Definition | Rhinovirus A89 strain RVA89/China/2018/BJR100 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVA89/China/2018/BJR100 | Sampling Date | 2018-02-08 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | -N/A- | NCBI Taxon ID | 12132 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA040230 | 5'UTR | 1 | 612 | 0 | 0 | 612 | |
| SQA040231 | CDS | 613 | 7107 | 0 | 0 | 6495 | |
| SQA040232 | VP4/2 | 613 | 1047 | 0 | 0 | 435 | |
| SQA040233 | 3D | 5725 | 7104 | 0 | 0 | 1380 | |
| SQA040234 | 2C (P2-C) | 3922 | 4884 | 0 | 0 | 963 | |
| SQA040235 | 1D (VP1) | 2335 | 3210 | 0 | 0 | 876 | |
| SQA040236 | 1B (VP2) | 820 | 1620 | 0 | 0 | 801 | |
| SQA040237 | 1C (VP3) | 1621 | 2334 | 0 | 0 | 714 | |
| SQA040238 | protease 3C | 5176 | 5724 | 0 | 0 | 549 | |
| SQA040239 | 2A (P2-A) | 3211 | 3636 | 0 | 0 | 426 | |
| SQA040240 | 2B (P2-B) | 3637 | 3921 | 0 | 0 | 285 | |
| SQA040241 | 3A (P3-A) | 4885 | 5112 | 0 | 0 | 228 | |
| SQA040242 | 1A (VP4) | 613 | 819 | 0 | 0 | 207 | |
| SQA040243 | 3B (VPg) | 5113 | 5175 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033785 | CDS | 1 | 2164 | 0 | 0 | 2164 | |
| SPA033859 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA034049 | 3D | 1705 | 2164 | 0 | 0 | 460 | |
| SPA034050 | 2C (P2-C) | 1104 | 1424 | 0 | 0 | 321 | |
| SPA034051 | 1D (VP1) | 575 | 866 | 0 | 0 | 292 | |
| SPA034052 | 1B (VP2) | 70 | 336 | 0 | 0 | 267 | |
| SPA034053 | 1C (VP3) | 337 | 574 | 0 | 0 | 238 | |
| SPA034054 | protease 3C | 1522 | 1704 | 0 | 0 | 183 | |
| SPA034055 | 2A (P2-A) | 867 | 1008 | 0 | 0 | 142 | |
| SPA034056 | 2B (P2-B) | 1009 | 1103 | 0 | 0 | 95 | |
| SPA034057 | 3A (P3-A) | 1425 | 1500 | 0 | 0 | 76 | |
| SPA034058 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA034059 | 3B (VPg) | 1501 | 1521 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |