| RVdb StrainID | ANS10107 | GenBank Accession | OP342709.1 |
| Species | RVA | Sequence Length | 7153 nt |
| Serotype | 106 Checked by RVdb | Serotype (GenBank) | 106 |
| Definition | Rhinovirus A106 strain RVA106/China/2014/HBH18 polyprotein gene, complete cds | GenBank Submission Date | 2022-12-13 |
| Strain Name | RVA106/China/2014/HBH18 | Sampling Date | 2014-04-28 |
| Sampling Country | China | Sampling location | Hebei |
| Isolation Source | -N/A- | NCBI Taxon ID | 2777144 |
| Sequencing Technology | Illumina | Assembly Method | Geneious Prime v. 2022.1.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA040201 | 3'UTR | 7113 | 7153 | 0 | 0 | 41 | |
| SQA040202 | 5'UTR | 1 | 617 | 0 | 0 | 617 | |
| SQA040203 | CDS | 618 | 7112 | 0 | 0 | 6495 | |
| SQA040204 | VP4/2 | 618 | 1052 | 0 | 0 | 435 | |
| SQA040205 | 3D | 5733 | 7109 | 0 | 0 | 1377 | |
| SQA040206 | 2C (P2-C) | 3924 | 4886 | 0 | 0 | 963 | |
| SQA040207 | 1D (VP1) | 2325 | 3209 | 0 | 0 | 885 | |
| SQA040208 | 1B (VP2) | 825 | 1610 | 0 | 0 | 786 | |
| SQA040209 | 1C (VP3) | 1611 | 2324 | 0 | 0 | 714 | |
| SQA040210 | protease 3C | 5184 | 5732 | 0 | 0 | 549 | |
| SQA040211 | 2A (P2-A) | 3210 | 3638 | 0 | 0 | 429 | |
| SQA040212 | 2B (P2-B) | 3639 | 3923 | 0 | 0 | 285 | |
| SQA040213 | 3A (P3-A) | 4887 | 5120 | 0 | 0 | 234 | |
| SQA040214 | 1A (VP4) | 618 | 824 | 0 | 0 | 207 | |
| SQA040215 | 3B (VPg) | 5121 | 5183 | 0 | 0 | 63 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA033786 | CDS | 1 | 2164 | 0 | 0 | 2164 | |
| SPA033860 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA034060 | 3D | 1706 | 2164 | 0 | 0 | 459 | |
| SPA034061 | 2C (P2-C) | 1103 | 1423 | 0 | 0 | 321 | |
| SPA034062 | 1D (VP1) | 570 | 864 | 0 | 0 | 295 | |
| SPA034063 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA034064 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA034065 | protease 3C | 1523 | 1705 | 0 | 0 | 183 | |
| SPA034066 | 2A (P2-A) | 865 | 1007 | 0 | 0 | 143 | |
| SPA034067 | 2B (P2-B) | 1008 | 1102 | 0 | 0 | 95 | |
| SPA034068 | 3A (P3-A) | 1424 | 1501 | 0 | 0 | 78 | |
| SPA034069 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA034070 | 3B (VPg) | 1502 | 1522 | 0 | 0 | 21 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 37733296 | Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. | 2023 | Microbiol Spectr | View More |