| RVdb StrainID | ANS10104 | GenBank Accession | OP114090.1 |
| Species | RVA | Sequence Length | 6482 nt |
| Serotype | 101 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus A isolate UFS-NGS_UNIT_Summer_SARI_B-Series polyprotein gene, partial cds | GenBank Submission Date | 2023-02-18 |
| Strain Name | UFS-NGS_UNIT_Summer_SARI_B-Series | Sampling Date | 2021 |
| Sampling Country | South Africa | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147711 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA040161 | CDS | 1 | 6482 | 0 | 1 | 6482 | |
| SQA040162 | VP4/2 | 1 | 435 | 0 | 0 | 435 | |
| SQA040163 | 3D | 5104 | 6480 | 0 | 0 | 1377 | |
| SQA040164 | 2C (P2-C) | 3295 | 4257 | 0 | 0 | 963 | |
| SQA040165 | 1D (VP1) | 1708 | 2583 | 0 | 0 | 876 | |
| SQA040166 | 1B (VP2) | 208 | 990 | 0 | 0 | 783 | |
| SQA040167 | 1C (VP3) | 994 | 1707 | 0 | 0 | 714 | |
| SQA040168 | protease 3C | 4555 | 5103 | 0 | 0 | 549 | |
| SQA040169 | 2A (P2-A) | 2584 | 3009 | 0 | 0 | 426 | |
| SQA040170 | 2B (P2-B) | 3010 | 3294 | 0 | 0 | 285 | |
| SQA040171 | 3A (P3-A) | 4258 | 4491 | 0 | 0 | 234 | |
| SQA040172 | 1A (VP4) | 1 | 207 | 0 | 0 | 207 | |
| SQA040173 | 3B (VPg) | 4492 | 4554 | 0 | 0 | 63 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 36423125 | Metagenomic Analysis of Respiratory RNA Virome of Children with and without Severe Acute Respiratory Infection from the Free State, South Africa during COVID-19 Pandemic Reveals Higher Diversity and Abundance in Summer Compared with Winter Period. | 2022 | Viruses | View More |