| RVdb StrainID | ANS08338 | GenBank Accession | DQ473497.1 |
| Species | RVA | Sequence Length | 7025 nt |
| Serotype | 23 Checked by RVdb | Serotype (GenBank) | 23 |
| Definition | Rhinovirus A23, complete genome | GenBank Submission Date | 2022-01-24 |
| Strain Name | -N/A- | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 12135 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA030703 | 1A (VP4) | 535 | 741 | 0 | 0 | 207 | |
| SQA030704 | 1B (VP2) | 742 | 1524 | 0 | 0 | 783 | |
| SQA030705 | 1C (VP3) | 1525 | 2232 | 0 | 0 | 708 | |
| SQA030706 | 1D (VP1) | 2233 | 3081 | 0 | 0 | 849 | |
| SQA030707 | 2A (P2-A) | 3082 | 3507 | 0 | 0 | 426 | |
| SQA030708 | 2B (P2-B) | 3508 | 3792 | 0 | 0 | 285 | |
| SQA030709 | 2C (P2-C) | 3793 | 4758 | 0 | 0 | 966 | |
| SQA030710 | 3'UTR | 6985 | 7025 | 0 | 1 | 41 | |
| SQA030711 | 3A (P3-A) | 4759 | 4989 | 0 | 0 | 231 | |
| SQA030712 | 3B (VPg) | 4990 | 5052 | 0 | 0 | 63 | |
| SQA030713 | protease 3C | 5053 | 5601 | 0 | 0 | 549 | |
| SQA030714 | 3D | 5602 | 6981 | 0 | 0 | 1380 | |
| SQA030715 | 5'UTR | 1 | 534 | 1 | 0 | 534 | |
| SQA030716 | CDS | 535 | 6984 | 0 | 0 | 6450 | |
| SQA030717 | VP4/2 | 535 | 969 | 0 | 0 | 435 | |
| SQA030718 | genome | 1 | 7025 | 1 | 1 | 7025 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA000607 | protease 3C | 1507 | 1689 | 0 | 0 | 183 | |
| SPA000608 | 3D | 1690 | 2149 | 0 | 0 | 460 | |
| SPA000609 | 3B (VPg) | 1486 | 1506 | 0 | 0 | 21 | |
| SPA000610 | 3A (P3-A) | 1409 | 1485 | 0 | 0 | 77 | |
| SPA000611 | 2C (P2-C) | 1087 | 1408 | 0 | 0 | 322 | |
| SPA000612 | 2B (P2-B) | 992 | 1086 | 0 | 0 | 95 | |
| SPA000613 | 2A (P2-A) | 850 | 991 | 0 | 0 | 142 | |
| SPA000614 | 1D (VP1) | 567 | 849 | 0 | 0 | 283 | |
| SPA000615 | 1C (VP3) | 331 | 566 | 0 | 0 | 236 | |
| SPA000616 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA000617 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA000618 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA000619 | CDS | 1 | 2149 | 0 | 0 | 2149 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 17477878 | Genome-wide diversity and selective pressure in the human rhinovirus. | 2007 | Virol J | View More |