RVdb StrainID | ANS07508 | GenBank Accession | M16248.1 |
Species | RVA | Sequence Length | 7152 nt |
Serotype | 89 Checked by RVdb | Serotype (GenBank) | 89 |
Definition | Human rhinovirus type 89 (HRV89), complete genome | GenBank Submission Date | 2003-02-07 |
Strain Name | -N/A- | Sampling Date | -N/A- |
Sampling Country | -N/A- | Sampling location | -N/A- |
Isolation Source | -N/A- | NCBI Taxon ID | 12132 |
Sequencing Technology | -N/A- | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA030148 | 1A (VP4) | 619 | 825 | 0 | 0 | 207 | |
SQA030149 | 1B (VP2) | 826 | 1626 | 0 | 0 | 801 | |
SQA030150 | 1C (VP3) | 1627 | 2340 | 0 | 0 | 714 | |
SQA030151 | 1D (VP1) | 2341 | 3234 | 0 | 0 | 894 | |
SQA030152 | 2A (P2-A) | 3235 | 3642 | 0 | 0 | 408 | |
SQA030153 | 2B (P2-B) | 3643 | 3927 | 0 | 0 | 285 | |
SQA030154 | 2C (P2-C) | 3928 | 4890 | 0 | 0 | 963 | |
SQA030155 | 3'UTR | 7114 | 7152 | 0 | 0 | 39 | |
SQA030156 | 3A (P3-A) | 4891 | 5118 | 0 | 0 | 228 | |
SQA030157 | 3B (VPg) | 5119 | 5181 | 0 | 0 | 63 | |
SQA030158 | protease 3C | 5182 | 5730 | 0 | 0 | 549 | |
SQA030159 | 3D | 5731 | 7110 | 0 | 0 | 1380 | |
SQA030160 | 5'UTR | 1 | 618 | 0 | 0 | 618 | |
SQA030161 | CDS | 619 | 7113 | 0 | 0 | 6495 | |
SQA030162 | VP4/2 | 619 | 1053 | 0 | 0 | 435 | |
SQA030163 | genome | 1 | 7152 | 0 | 0 | 7152 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA000087 | protease 3C | 1522 | 1704 | 0 | 0 | 183 | |
SPA000088 | 3D | 1705 | 2164 | 0 | 0 | 460 | |
SPA000089 | 3B (VPg) | 1501 | 1521 | 0 | 0 | 21 | |
SPA000090 | 3A (P3-A) | 1425 | 1500 | 0 | 0 | 76 | |
SPA000091 | 2C (P2-C) | 1104 | 1424 | 0 | 0 | 321 | |
SPA000092 | 2B (P2-B) | 1009 | 1103 | 0 | 0 | 95 | |
SPA000093 | 2A (P2-A) | 873 | 1008 | 0 | 0 | 136 | |
SPA000094 | 1D (VP1) | 575 | 872 | 0 | 0 | 298 | |
SPA000095 | 1C (VP3) | 337 | 574 | 0 | 0 | 238 | |
SPA000096 | 1B (VP2) | 70 | 336 | 0 | 0 | 267 | |
SPA000097 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA000098 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
SPA000099 | CDS | 1 | 2164 | 0 | 0 | 2164 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
3033653 | Evolutionary relationships within the human rhinovirus genus: comparison of serotypes 89, 2, and 14. | 1987 | Proc Natl Acad Sci U S A | View More |