RVdb StrainID | ANS05093 | GenBank Accession | KR059990.1 |
Species | RVA | Sequence Length | 438 nt |
Serotype | 30 | Serotype (GenBank) | 30 |
Definition | Rhinovirus A isolate KENHRV002 polyprotein gene, partial cds | GenBank Submission Date | 2016-05-12 |
Strain Name | KENHRV002 | Sampling Date | 2008-02-14 |
Sampling Country | Kenya | Sampling location | Nairobi |
Isolation Source | nasopharyngeal | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAbaser v. version 4.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA028640 | 1A (VP4) | 16 | 222 | 0 | 0 | 207 | |
SQA028641 | 5'UTR | 1 | 15 | 1 | 0 | 15 | |
SQA028642 | CDS | 16 | 438 | 0 | 1 | 423 | |
SQA028643 | VP4/2 | 16 | 438 | 0 | 1 | 423 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA008277 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA008278 | VP4/2 | 1 | 141 | 0 | 1 | 141 | |
SPA008279 | CDS | 1 | 141 | 0 | 0 | 141 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26822469 | Serotype and genetic diversity of human rhinovirus strains that circulated in Kenya in 2008. | 2016 | Influenza Other Respir Viruses | View More |