RVdb StrainID | ANS05083 | GenBank Accession | KR060000.1 |
Species | RVA | Sequence Length | 441 nt |
Serotype | 78 | Serotype (GenBank) | 78 |
Definition | Rhinovirus A isolate KENHRV014 polyprotein gene, partial cds | GenBank Submission Date | 2016-05-12 |
Strain Name | KENHRV014 | Sampling Date | 2008-05-28 |
Sampling Country | Kenya | Sampling location | Nairobi |
Isolation Source | nasopharyngeal | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAbaser v. version 4.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA028632 | 1A (VP4) | 28 | 234 | 0 | 0 | 207 | |
SQA028633 | 5'UTR | 1 | 27 | 1 | 0 | 27 | |
SQA028634 | CDS | 28 | 441 | 0 | 1 | 414 | |
SQA028635 | VP4/2 | 28 | 441 | 0 | 1 | 414 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA008307 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA008308 | VP4/2 | 1 | 138 | 0 | 1 | 138 | |
SPA008309 | CDS | 1 | 138 | 0 | 0 | 138 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26822469 | Serotype and genetic diversity of human rhinovirus strains that circulated in Kenya in 2008. | 2016 | Influenza Other Respir Viruses | View More |