| RVdb StrainID | ANS05078 | GenBank Accession | KR871675.1 |
| Species | RVA | Sequence Length | 7163 nt |
| Serotype | 21 Checked by RVdb | Serotype (GenBank) | 21 |
| Definition | Rhinovirus A isolate PUMCH13515/2013 polyprotein gene, complete cds | GenBank Submission Date | 2017-03-01 |
| Strain Name | PUMCH13515/2013 | Sampling Date | 2013-09-29 |
| Sampling Country | China | Sampling location | Beijing |
| Isolation Source | nasal and throat swab | NCBI Taxon ID | 147711 |
| Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA028616 | 1A (VP4) | 615 | 821 | 0 | 0 | 207 | |
| SQA028617 | 1B (VP2) | 822 | 1602 | 0 | 0 | 781 | |
| SQA028618 | 1C (VP3) | 1603 | 2324 | 0 | 0 | 722 | |
| SQA028619 | 1D (VP1) | 2325 | 3185 | 0 | 0 | 861 | |
| SQA028620 | 2A (P2-A) | 3186 | 3611 | 0 | 0 | 426 | |
| SQA028621 | 2B (P2-B) | 3612 | 3896 | 0 | 0 | 285 | |
| SQA028622 | 2C (P2-C) | 3897 | 4862 | 0 | 0 | 966 | |
| SQA028623 | 3'UTR | 7089 | 7134 | 0 | 0 | 46 | |
| SQA028624 | 3A (P3-A) | 4863 | 5093 | 0 | 0 | 231 | |
| SQA028625 | 3B (VPg) | 5094 | 5156 | 0 | 0 | 63 | |
| SQA028626 | protease 3C | 5157 | 5705 | 0 | 0 | 549 | |
| SQA028627 | 3D | 5706 | 7085 | 0 | 0 | 1380 | |
| SQA028628 | 5'UTR | 1 | 614 | 1 | 0 | 614 | |
| SQA028629 | CDS | 615 | 7088 | 0 | 0 | 6474 | |
| SQA028630 | VP4/2 | 615 | 1049 | 0 | 0 | 435 | |
| SQA028631 | genome | 1 | 7163 | 1 | 0 | 7163 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA007949 | protease 3C | 1515 | 1697 | 0 | 0 | 183 | |
| SPA007950 | 3D | 1698 | 2153 | 0 | 0 | 456 | |
| SPA007951 | 3B (VPg) | 1494 | 1514 | 0 | 0 | 21 | |
| SPA007952 | 3A (P3-A) | 1417 | 1493 | 0 | 0 | 77 | |
| SPA007953 | 2C (P2-C) | 1095 | 1416 | 0 | 0 | 322 | |
| SPA007954 | 2B (P2-B) | 1000 | 1094 | 0 | 0 | 95 | |
| SPA007955 | 2A (P2-A) | 858 | 999 | 0 | 0 | 142 | |
| SPA007956 | 1D (VP1) | 571 | 857 | 0 | 0 | 287 | |
| SPA007957 | 1C (VP3) | 330 | 570 | 0 | 0 | 241 | |
| SPA007958 | 1B (VP2) | 70 | 329 | 0 | 0 | 260 | |
| SPA007959 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA007960 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA007961 | CDS | 1 | 2157 | 0 | 0 | 2157 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 28128353 | Genotyping of human rhinovirus in adult patients with acute respiratory infections identified predominant infections of genotype A21. | 2017 | Sci Rep | View More |