| RVdb StrainID | ANS04373 | GenBank Accession | KY460514.1 |
| Species | RVA | Sequence Length | 6477 nt |
| Serotype | 101 Checked by RVdb | Serotype (GenBank) | 101 |
| Definition | Rhinovirus A101 isolate TW-00006-2010, complete genome | GenBank Submission Date | 2017-07-18 |
| Strain Name | TW-00006-2010 | Sampling Date | 2010-03-03 |
| Sampling Country | China | Sampling location | -N/A- |
| Isolation Source | nasopharyngeal | NCBI Taxon ID | 1219381 |
| Sequencing Technology | Illumina | Assembly Method | CLC Genomics Workbench v. 7.5 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA028157 | 1A (VP4) | 1 | 207 | 0 | 0 | 207 | |
| SQA028158 | 1B (VP2) | 208 | 993 | 0 | 0 | 786 | |
| SQA028159 | 1C (VP3) | 994 | 1707 | 0 | 0 | 714 | |
| SQA028160 | 1D (VP1) | 1708 | 2574 | 0 | 0 | 867 | |
| SQA028161 | 2A (P2-A) | 2575 | 3003 | 0 | 0 | 429 | |
| SQA028162 | 2B (P2-B) | 3004 | 3288 | 0 | 0 | 285 | |
| SQA028163 | 2C (P2-C) | 3289 | 4251 | 0 | 0 | 963 | |
| SQA028164 | 3A (P3-A) | 4252 | 4485 | 0 | 0 | 234 | |
| SQA028165 | 3B (VPg) | 4486 | 4548 | 0 | 0 | 63 | |
| SQA028166 | protease 3C | 4549 | 5097 | 0 | 0 | 549 | |
| SQA028167 | 3D | 5098 | 6474 | 0 | 0 | 1377 | |
| SQA028168 | CDS | 1 | 6477 | 0 | 0 | 6477 | |
| SQA028169 | VP4/2 | 1 | 435 | 0 | 0 | 435 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA011176 | protease 3C | 1517 | 1699 | 0 | 0 | 183 | |
| SPA011177 | 3D | 1700 | 2158 | 0 | 0 | 459 | |
| SPA011178 | 3B (VPg) | 1496 | 1516 | 0 | 0 | 21 | |
| SPA011179 | 3A (P3-A) | 1418 | 1495 | 0 | 0 | 78 | |
| SPA011180 | 2C (P2-C) | 1097 | 1417 | 0 | 0 | 321 | |
| SPA011181 | 2B (P2-B) | 1002 | 1096 | 0 | 0 | 95 | |
| SPA011182 | 2A (P2-A) | 859 | 1001 | 0 | 0 | 143 | |
| SPA011183 | 1D (VP1) | 570 | 858 | 0 | 0 | 289 | |
| SPA011184 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA011185 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA011186 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA011187 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA011188 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 28424887 | A metagenomics study for the identification of respiratory viruses in mixed clinical specimens: an application of the iterative mapping approach. | 2017 | Arch Virol | View More |