| RVdb StrainID | ANS00143 | GenBank Accession | OM001401.1 |
| Species | RVA | Sequence Length | 7057 nt |
| Serotype | 24 Checked by RVdb | Serotype (GenBank) | 24 |
| Definition | Rhinovirus A24 strain RvA24/USA/2021/6CMP7W, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA24/USA/2021/6CMP7W | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185897 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA023941 | 1A (VP4) | 547 | 753 | 0 | 0 | 207 | |
| SQA023942 | 1B (VP2) | 754 | 1539 | 0 | 0 | 786 | |
| SQA023943 | 1C (VP3) | 1540 | 2253 | 0 | 0 | 714 | |
| SQA023944 | 1D (VP1) | 2254 | 3108 | 0 | 0 | 855 | |
| SQA023945 | 2A (P2-A) | 3109 | 3534 | 0 | 0 | 426 | |
| SQA023946 | 2B (P2-B) | 3535 | 3819 | 0 | 0 | 285 | |
| SQA023947 | 2C (P2-C) | 3820 | 4785 | 0 | 0 | 966 | |
| SQA023948 | 3'UTR | 7012 | 7057 | 0 | 0 | 46 | |
| SQA023949 | 3A (P3-A) | 4786 | 5016 | 0 | 0 | 231 | |
| SQA023950 | 3B (VPg) | 5017 | 5079 | 0 | 0 | 63 | |
| SQA023951 | protease 3C | 5080 | 5628 | 0 | 0 | 549 | |
| SQA023952 | 3D | 5629 | 7008 | 0 | 0 | 1380 | |
| SQA023953 | 5'UTR | 1 | 546 | 1 | 0 | 546 | |
| SQA023954 | CDS | 547 | 7011 | 0 | 0 | 6465 | |
| SQA023955 | VP4/2 | 547 | 981 | 0 | 0 | 435 | |
| SQA023956 | genome | 1 | 7057 | 1 | 0 | 7057 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA026886 | protease 3C | 1512 | 1694 | 0 | 0 | 183 | |
| SPA026887 | 3D | 1695 | 2142 | 0 | 0 | 448 | |
| SPA026888 | 3B (VPg) | 1491 | 1511 | 0 | 0 | 21 | |
| SPA026889 | 3A (P3-A) | 1414 | 1490 | 0 | 0 | 77 | |
| SPA026890 | 2C (P2-C) | 1092 | 1413 | 0 | 0 | 322 | |
| SPA026891 | 2B (P2-B) | 997 | 1091 | 0 | 0 | 95 | |
| SPA026892 | 2A (P2-A) | 855 | 996 | 0 | 0 | 142 | |
| SPA026893 | 1D (VP1) | 570 | 854 | 0 | 0 | 285 | |
| SPA026894 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA026895 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA026896 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA026897 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA026898 | CDS | 1 | 2154 | 0 | 0 | 2154 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |