| RVdb StrainID | ANS00113 | GenBank Accession | OM001444.1 |
| Species | RVA | Sequence Length | 7058 nt |
| Serotype | 30 Checked by RVdb | Serotype (GenBank) | 30 |
| Definition | Rhinovirus A30 strain RvA30/USA/2021/PTHD49, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA30/USA/2021/PTHD49 | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185901 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA023845 | 1A (VP4) | 569 | 775 | 0 | 0 | 207 | |
| SQA023846 | 1B (VP2) | 776 | 1546 | 0 | 0 | 771 | |
| SQA023847 | 1C (VP3) | 1547 | 2269 | 0 | 0 | 723 | |
| SQA023848 | 1D (VP1) | 2270 | 3118 | 0 | 0 | 849 | |
| SQA023849 | 2A (P2-A) | 3119 | 3544 | 0 | 0 | 426 | |
| SQA023850 | 2B (P2-B) | 3545 | 3829 | 0 | 0 | 285 | |
| SQA023851 | 2C (P2-C) | 3830 | 4795 | 0 | 0 | 966 | |
| SQA023852 | 3'UTR | 7022 | 7058 | 0 | 1 | 37 | |
| SQA023853 | 3A (P3-A) | 4796 | 5026 | 0 | 0 | 231 | |
| SQA023854 | 3B (VPg) | 5027 | 5089 | 0 | 0 | 63 | |
| SQA023855 | protease 3C | 5090 | 5638 | 0 | 0 | 549 | |
| SQA023856 | 3D | 5639 | 7018 | 0 | 0 | 1380 | |
| SQA023857 | 5'UTR | 1 | 568 | 1 | 0 | 568 | |
| SQA023858 | CDS | 569 | 7021 | 0 | 0 | 6453 | |
| SQA023859 | VP4/2 | 569 | 1003 | 0 | 0 | 435 | |
| SQA023860 | genome | 1 | 7058 | 1 | 1 | 7058 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA027276 | protease 3C | 1508 | 1690 | 0 | 0 | 183 | |
| SPA027277 | 3D | 1691 | 2146 | 0 | 0 | 456 | |
| SPA027278 | 3B (VPg) | 1487 | 1507 | 0 | 0 | 21 | |
| SPA027279 | 3A (P3-A) | 1410 | 1486 | 0 | 0 | 77 | |
| SPA027280 | 2C (P2-C) | 1088 | 1409 | 0 | 0 | 322 | |
| SPA027281 | 2B (P2-B) | 993 | 1087 | 0 | 0 | 95 | |
| SPA027282 | 2A (P2-A) | 851 | 992 | 0 | 0 | 142 | |
| SPA027283 | 1D (VP1) | 568 | 850 | 0 | 0 | 283 | |
| SPA027284 | 1C (VP3) | 331 | 567 | 0 | 0 | 237 | |
| SPA027285 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA027286 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA027287 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA027288 | CDS | 1 | 2150 | 0 | 0 | 2150 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |