| RVdb StrainID | ANP08342 | GenBank Accession | DQ473493.1 |
| Species | RVA | Sequence Length | 7134 nt |
| Serotype | 15 Checked by RVdb | Serotype (GenBank) | 15 |
| Definition | Rhinovirus A15, complete genome | GenBank Submission Date | 2022-01-24 |
| Strain Name | -N/A- | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185894 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA022971 | 1A (VP4) | 616 | 822 | 0 | 0 | 207 | |
| SQA022972 | 1B (VP2) | 823 | 1608 | 0 | 0 | 786 | |
| SQA022973 | 1C (VP3) | 1609 | 2322 | 0 | 0 | 714 | |
| SQA022974 | 1D (VP1) | 2323 | 3192 | 0 | 0 | 870 | |
| SQA022975 | 2A (P2-A) | 3193 | 3618 | 0 | 0 | 426 | |
| SQA022976 | 2B (P2-B) | 3619 | 3903 | 0 | 0 | 285 | |
| SQA022977 | 2C (P2-C) | 3904 | 4869 | 0 | 0 | 966 | |
| SQA022978 | 3'UTR | 7096 | 7134 | 0 | 0 | 39 | |
| SQA022979 | 3A (P3-A) | 4870 | 5100 | 0 | 0 | 231 | |
| SQA022980 | 3B (VPg) | 5101 | 5163 | 0 | 0 | 63 | |
| SQA022981 | protease 3C | 5164 | 5712 | 0 | 0 | 549 | |
| SQA022982 | 3D | 5713 | 7092 | 0 | 0 | 1380 | |
| SQA022983 | 5'UTR | 1 | 615 | 0 | 0 | 615 | |
| SQA022984 | CDS | 616 | 7095 | 0 | 0 | 6480 | |
| SQA022985 | VP4/2 | 616 | 1050 | 0 | 0 | 435 | |
| SQA022986 | genome | 1 | 7134 | 0 | 0 | 7134 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA000555 | protease 3C | 1517 | 1699 | 0 | 0 | 183 | |
| SPA000556 | 3D | 1700 | 2159 | 0 | 0 | 460 | |
| SPA000557 | 3B (VPg) | 1496 | 1516 | 0 | 0 | 21 | |
| SPA000558 | 3A (P3-A) | 1419 | 1495 | 0 | 0 | 77 | |
| SPA000559 | 2C (P2-C) | 1097 | 1418 | 0 | 0 | 322 | |
| SPA000560 | 2B (P2-B) | 1002 | 1096 | 0 | 0 | 95 | |
| SPA000561 | 2A (P2-A) | 860 | 1001 | 0 | 0 | 142 | |
| SPA000562 | 1D (VP1) | 570 | 859 | 0 | 0 | 290 | |
| SPA000563 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA000564 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA000565 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA000566 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA000567 | CDS | 1 | 2159 | 0 | 0 | 2159 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 17477878 | Genome-wide diversity and selective pressure in the human rhinovirus. | 2007 | Virol J | View More |