| RVdb StrainID | ANP08327 | GenBank Accession | DQ473508.1 |
| Species | RVA | Sequence Length | 7148 nt |
| Serotype | 28 Checked by RVdb | Serotype (GenBank) | 28 |
| Definition | Rhinovirus A28, complete genome | GenBank Submission Date | 2022-01-24 |
| Strain Name | -N/A- | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147672 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA022923 | 1A (VP4) | 622 | 828 | 0 | 0 | 207 | |
| SQA022924 | 1B (VP2) | 829 | 1617 | 0 | 0 | 789 | |
| SQA022925 | 1C (VP3) | 1618 | 2331 | 0 | 0 | 714 | |
| SQA022926 | 1D (VP1) | 2332 | 3204 | 0 | 0 | 873 | |
| SQA022927 | 2A (P2-A) | 3205 | 3633 | 0 | 0 | 429 | |
| SQA022928 | 2B (P2-B) | 3634 | 3918 | 0 | 0 | 285 | |
| SQA022929 | 2C (P2-C) | 3919 | 4881 | 0 | 0 | 963 | |
| SQA022930 | 3'UTR | 7108 | 7148 | 0 | 0 | 41 | |
| SQA022931 | 3A (P3-A) | 4882 | 5115 | 0 | 0 | 234 | |
| SQA022932 | 3B (VPg) | 5116 | 5178 | 0 | 0 | 63 | |
| SQA022933 | protease 3C | 5179 | 5727 | 0 | 0 | 549 | |
| SQA022934 | 3D | 5728 | 7104 | 0 | 0 | 1377 | |
| SQA022935 | 5'UTR | 1 | 621 | 0 | 0 | 621 | |
| SQA022936 | CDS | 622 | 7107 | 0 | 0 | 6486 | |
| SQA022937 | VP4/2 | 622 | 1056 | 0 | 0 | 435 | |
| SQA022938 | genome | 1 | 7148 | 0 | 0 | 7148 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA000750 | protease 3C | 1520 | 1702 | 0 | 0 | 183 | |
| SPA000751 | 3D | 1703 | 2161 | 0 | 0 | 459 | |
| SPA000752 | 3B (VPg) | 1499 | 1519 | 0 | 0 | 21 | |
| SPA000753 | 3A (P3-A) | 1421 | 1498 | 0 | 0 | 78 | |
| SPA000754 | 2C (P2-C) | 1100 | 1420 | 0 | 0 | 321 | |
| SPA000755 | 2B (P2-B) | 1005 | 1099 | 0 | 0 | 95 | |
| SPA000756 | 2A (P2-A) | 862 | 1004 | 0 | 0 | 143 | |
| SPA000757 | 1D (VP1) | 571 | 861 | 0 | 0 | 291 | |
| SPA000758 | 1C (VP3) | 333 | 570 | 0 | 0 | 238 | |
| SPA000759 | 1B (VP2) | 70 | 332 | 0 | 0 | 263 | |
| SPA000760 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA000761 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA000762 | CDS | 1 | 2161 | 0 | 0 | 2161 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 17477878 | Genome-wide diversity and selective pressure in the human rhinovirus. | 2007 | Virol J | View More |