RVdb StrainID ANP08317 GenBank Accession EF173417.1
Species RVA Sequence Length 7129 nt
Serotype 64  Checked by RVdb Serotype (GenBank) 64
Definition Human rhinovirus 64, complete genome GenBank Submission Date 2007-07-15
Strain Name -N/A- Sampling Date -N/A-
Sampling Country -N/A- Sampling location -N/A-
Isolation Source -N/A- NCBI Taxon ID 185922
Sequencing Technology -N/A- Assembly Method -N/A-

Download selected NT sequences
SeqID Gene Name Start End StartTruncated EndTruncated Length
SQA022904 1A (VP4) 615 821 0 0 207
SQA022905 1B (VP2) 822 1604 0 0 783
SQA022906 1C (VP3) 1605 2315 0 0 711
SQA022907 1D (VP1) 2316 3182 0 0 867
SQA022908 2A (P2-A) 3183 3608 0 0 426
SQA022909 2B (P2-B) 3609 3893 0 0 285
SQA022910 2C (P2-C) 3894 4859 0 0 966
SQA022911 3'UTR 7086 7129 0 0 44
SQA022912 3A (P3-A) 4860 5090 0 0 231
SQA022913 3B (VPg) 5091 5153 0 0 63
SQA022914 protease 3C 5154 5702 0 0 549
SQA022915 3D 5703 7082 0 0 1380
SQA022916 5'UTR 1 614 0 0 614
SQA022917 CDS 615 7085 0 0 6471
SQA022918 VP4/2 615 1049 0 0 435
SQA022919 genome 1 7129 0 0 7129
Download selected AA sequences
SeqID Gene Name Start End StartTruncated EndTruncated Length
SPA000879 protease 3C 1514 1696 0 0 183
SPA000880 3D 1697 2156 0 0 460
SPA000881 3B (VPg) 1493 1513 0 0 21
SPA000882 3A (P3-A) 1416 1492 0 0 77
SPA000883 2C (P2-C) 1094 1415 0 0 322
SPA000884 2B (P2-B) 999 1093 0 0 95
SPA000885 2A (P2-A) 857 998 0 0 142
SPA000886 1D (VP1) 568 856 0 0 289
SPA000887 1C (VP3) 331 567 0 0 237
SPA000888 1B (VP2) 70 330 0 0 261
SPA000889 1A (VP4) 1 69 0 0 69
SPA000890 VP4/2 1 145 0 0 145
SPA000891 CDS 1 2156 0 0 2156
PMID Title Publication Year Journal View in RVdb
17623054 New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features. 2007 BMC Genomics View More