| RVdb StrainID | ANP08092 | GenBank Accession | EU840727.1 |
| Species | RVA | Sequence Length | 7071 nt |
| Serotype | 56 Checked by RVdb | Serotype (GenBank) | 56 |
| Definition | Human rhinovirus 56 polyprotein gene, partial cds | GenBank Submission Date | 2016-07-24 |
| Strain Name | -N/A- | Sampling Date | from 1999 to 2008 |
| Sampling Country | Switzerland | Sampling location | different regions of Switzerland |
| Isolation Source | -N/A- | NCBI Taxon ID | 185916 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA022818 | 1A (VP4) | 598 | 804 | 0 | 0 | 207 | |
| SQA022819 | 1B (VP2) | 805 | 1599 | 0 | 0 | 795 | |
| SQA022820 | 1C (VP3) | 1600 | 2280 | 0 | 0 | 681 | |
| SQA022821 | 1D (VP1) | 2281 | 3171 | 0 | 0 | 891 | |
| SQA022822 | 2A (P2-A) | 3172 | 3597 | 0 | 0 | 426 | |
| SQA022823 | 2B (P2-B) | 3598 | 3882 | 0 | 0 | 285 | |
| SQA022824 | 2C (P2-C) | 3883 | 4848 | 0 | 0 | 966 | |
| SQA022825 | 3A (P3-A) | 4849 | 5079 | 0 | 0 | 231 | |
| SQA022826 | 3B (VPg) | 5080 | 5142 | 0 | 0 | 63 | |
| SQA022827 | protease 3C | 5143 | 5691 | 0 | 0 | 549 | |
| SQA022828 | 3D | 5692 | 7071 | 0 | 1 | 1380 | |
| SQA022829 | 5'UTR | 1 | 597 | 1 | 0 | 597 | |
| SQA022830 | CDS | 598 | 7071 | 0 | 1 | 6474 | |
| SQA022831 | VP4/2 | 598 | 1032 | 0 | 0 | 435 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA002209 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA002210 | 3D | 1699 | 2154 | 0 | 0 | 456 | |
| SPA002211 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA002212 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA002213 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA002214 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA002215 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA002216 | 1D (VP1) | 573 | 858 | 0 | 0 | 286 | |
| SPA002217 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA002218 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA002219 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA002220 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA002221 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 19402957 | New respiratory enterovirus and recombinant rhinoviruses among circulating picornaviruses. | 2009 | Emerg Infect Dis | View More |