RVdb StrainID | ANP05092 | GenBank Accession | KR059991.1 |
Species | RVA | Sequence Length | 405 nt |
Serotype | 1 | Serotype (GenBank) | 1 |
Definition | Rhinovirus A isolate KENHRV003 polyprotein gene, partial cds | GenBank Submission Date | 2016-05-12 |
Strain Name | KENHRV003 | Sampling Date | 2008-09-25 |
Sampling Country | Kenya | Sampling location | Nairobi |
Isolation Source | nasopharyngeal | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAbaser v. version 4.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA020894 | 1A (VP4) | 16 | 222 | 0 | 0 | 207 | |
SQA020895 | 5'UTR | 1 | 15 | 1 | 0 | 15 | |
SQA020896 | CDS | 16 | 405 | 0 | 1 | 390 | |
SQA020897 | VP4/2 | 16 | 405 | 0 | 1 | 390 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA008280 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA008281 | VP4/2 | 1 | 130 | 0 | 1 | 130 | |
SPA008282 | CDS | 1 | 130 | 0 | 0 | 130 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26822469 | Serotype and genetic diversity of human rhinovirus strains that circulated in Kenya in 2008. | 2016 | Influenza Other Respir Viruses | View More |