RVdb StrainID | ANP05087 | GenBank Accession | KR059996.1 |
Species | RVA | Sequence Length | 498 nt |
Serotype | 49 | Serotype (GenBank) | 49 |
Definition | Rhinovirus A isolate KENHRV010 polyprotein gene, partial cds | GenBank Submission Date | 2016-05-12 |
Strain Name | KENHRV010 | Sampling Date | 2008-03-10 |
Sampling Country | Kenya | Sampling location | Nairobi |
Isolation Source | nasopharyngeal | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAbaser v. version 4.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA020890 | 1A (VP4) | 79 | 285 | 0 | 0 | 207 | |
SQA020891 | 5'UTR | 1 | 78 | 1 | 0 | 78 | |
SQA020892 | CDS | 79 | 498 | 0 | 1 | 420 | |
SQA020893 | VP4/2 | 79 | 498 | 0 | 1 | 420 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA008295 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA008296 | VP4/2 | 1 | 140 | 0 | 1 | 140 | |
SPA008297 | CDS | 1 | 140 | 0 | 0 | 140 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26822469 | Serotype and genetic diversity of human rhinovirus strains that circulated in Kenya in 2008. | 2016 | Influenza Other Respir Viruses | View More |