RVdb StrainID | ANP05082 | GenBank Accession | KR060001.1 |
Species | RVA | Sequence Length | 411 nt |
Serotype | 58 | Serotype (GenBank) | 58 |
Definition | Rhinovirus A isolate KENHRV015 polyprotein gene, partial cds | GenBank Submission Date | 2016-05-12 |
Strain Name | KENHRV015 | Sampling Date | 2008-06-09 |
Sampling Country | Kenya | Sampling location | Nairobi |
Isolation Source | nasopharyngeal | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAbaser v. version 4.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA020886 | 1A (VP4) | 10 | 216 | 0 | 0 | 207 | |
SQA020887 | 5'UTR | 1 | 9 | 1 | 0 | 9 | |
SQA020888 | CDS | 10 | 411 | 0 | 1 | 402 | |
SQA020889 | VP4/2 | 10 | 411 | 0 | 1 | 402 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA008310 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA008311 | VP4/2 | 1 | 134 | 0 | 1 | 134 | |
SPA008312 | CDS | 1 | 134 | 0 | 0 | 134 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26822469 | Serotype and genetic diversity of human rhinovirus strains that circulated in Kenya in 2008. | 2016 | Influenza Other Respir Viruses | View More |