RVdb StrainID | ANP04947 | GenBank Accession | KT751300.1 |
Species | RVA | Sequence Length | 3019 nt |
Serotype | 67 Added by RVdb | Serotype (GenBank) | -N/A- |
Definition | Rhinovirus A isolate A36/67_ID976T polyprotein gene, partial cds | GenBank Submission Date | 2015-12-17 |
Strain Name | A36/67_ID976T | Sampling Date | 2008-11-26 |
Sampling Country | Tanzania | Sampling location | -N/A- |
Isolation Source | nasopharynx | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA020796 | 1A (VP4) | 454 | 660 | 0 | 0 | 207 | |
SQA020797 | 1B (VP2) | 661 | 1446 | 0 | 0 | 786 | |
SQA020798 | 1C (VP3) | 1447 | 2163 | 0 | 0 | 717 | |
SQA020799 | 1D (VP1) | 2164 | 3019 | 0 | 1 | 856 | |
SQA020800 | 5'UTR | 1 | 453 | 1 | 0 | 453 | |
SQA020801 | CDS | 454 | 3019 | 0 | 1 | 2566 | |
SQA020802 | VP4/2 | 454 | 888 | 0 | 0 | 435 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA008622 | 1D (VP1) | 571 | 855 | 0 | 1 | 285 | |
SPA008623 | 1C (VP3) | 332 | 570 | 0 | 0 | 239 | |
SPA008624 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
SPA008625 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA008626 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
SPA008627 | CDS | 1 | 855 | 0 | 0 | 855 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26670243 | Molecular Epidemiology of Human Rhinoviruses and Enteroviruses Highlights Their Diversity in Sub-Saharan Africa. | 2015 | Viruses | View More |