| RVdb StrainID | ANP03247 | GenBank Accession | MH828516.1 |
| Species | RVA | Sequence Length | 6468 nt |
| Serotype | 80 Added by RVdb | Serotype (GenBank) | -N/A- |
| Definition | Rhinovirus A strain vzhrva2 polyprotein gene, partial cds | GenBank Submission Date | 2018-10-01 |
| Strain Name | vzhrva2 | Sampling Date | 2015-01-28 |
| Sampling Country | Viet Nam | Sampling location | -N/A- |
| Isolation Source | NT swab | NCBI Taxon ID | 147711 |
| Sequencing Technology | Illumina | Assembly Method | CLC Assembly v. 5.0.4 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA019769 | 1A (VP4) | 1 | 207 | 0 | 0 | 207 | |
| SQA019770 | 1B (VP2) | 208 | 993 | 0 | 0 | 786 | |
| SQA019771 | 1C (VP3) | 994 | 1707 | 0 | 0 | 714 | |
| SQA019772 | 1D (VP1) | 1708 | 2583 | 0 | 0 | 876 | |
| SQA019773 | 2A (P2-A) | 2584 | 3012 | 0 | 0 | 429 | |
| SQA019774 | 2B (P2-B) | 3013 | 3297 | 0 | 0 | 285 | |
| SQA019775 | 2C (P2-C) | 3298 | 4260 | 0 | 0 | 963 | |
| SQA019776 | 3A (P3-A) | 4261 | 4491 | 0 | 0 | 231 | |
| SQA019777 | 3B (VPg) | 4492 | 4554 | 0 | 0 | 63 | |
| SQA019778 | protease 3C | 4555 | 5103 | 0 | 0 | 549 | |
| SQA019779 | 3D | 5104 | 6468 | 0 | 1 | 1365 | |
| SQA019780 | CDS | 1 | 6468 | 0 | 1 | 6468 | |
| SQA019781 | VP4/2 | 1 | 435 | 0 | 0 | 435 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA029423 | protease 3C | 1519 | 1701 | 0 | 0 | 183 | |
| SPA029424 | 3D | 1702 | 2156 | 0 | 1 | 455 | |
| SPA029425 | 3B (VPg) | 1498 | 1518 | 0 | 0 | 21 | |
| SPA029426 | 3A (P3-A) | 1421 | 1497 | 0 | 0 | 77 | |
| SPA029427 | 2C (P2-C) | 1100 | 1420 | 0 | 0 | 321 | |
| SPA029428 | 2B (P2-B) | 1006 | 1099 | 0 | 0 | 94 | |
| SPA029429 | 2A (P2-A) | 862 | 1005 | 0 | 0 | 144 | |
| SPA029430 | 1D (VP1) | 570 | 861 | 0 | 0 | 292 | |
| SPA029431 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA029432 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA029433 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA029434 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA029435 | CDS | 1 | 2156 | 0 | 0 | 2156 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 32499763 | Epidemiology and Phylogenetic Analysis of Viral Respiratory Infections in Vietnam. | 2020 | Front Microbiol | View More |