| RVdb StrainID | ANP00112 | GenBank Accession | OM001445.1 |
| Species | RVA | Sequence Length | 7078 nt |
| Serotype | 25 Checked by RVdb | Serotype (GenBank) | 25 |
| Definition | Rhinovirus A25 strain RvA25/USA/2021/QLQU2B, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA25/USA/2021/QLQU2B | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185898 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA016042 | 1A (VP4) | 565 | 771 | 0 | 0 | 207 | |
| SQA016043 | 1B (VP2) | 772 | 1569 | 0 | 0 | 798 | |
| SQA016044 | 1C (VP3) | 1570 | 2283 | 0 | 0 | 714 | |
| SQA016045 | 1D (VP1) | 2284 | 3129 | 0 | 0 | 846 | |
| SQA016046 | 2A (P2-A) | 3130 | 3555 | 0 | 0 | 426 | |
| SQA016047 | 2B (P2-B) | 3556 | 3840 | 0 | 0 | 285 | |
| SQA016048 | 2C (P2-C) | 3841 | 4806 | 0 | 0 | 966 | |
| SQA016049 | 3'UTR | 7033 | 7078 | 0 | 0 | 46 | |
| SQA016050 | 3A (P3-A) | 4807 | 5037 | 0 | 0 | 231 | |
| SQA016051 | 3B (VPg) | 5038 | 5100 | 0 | 0 | 63 | |
| SQA016052 | protease 3C | 5101 | 5649 | 0 | 0 | 549 | |
| SQA016053 | 3D | 5650 | 7029 | 0 | 0 | 1380 | |
| SQA016054 | 5'UTR | 1 | 564 | 1 | 0 | 564 | |
| SQA016055 | CDS | 565 | 7032 | 0 | 0 | 6468 | |
| SQA016056 | VP4/2 | 565 | 999 | 0 | 0 | 435 | |
| SQA016057 | genome | 1 | 7078 | 1 | 0 | 7078 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA027289 | protease 3C | 1513 | 1695 | 0 | 0 | 183 | |
| SPA027290 | 3D | 1696 | 2151 | 0 | 0 | 456 | |
| SPA027291 | 3B (VPg) | 1492 | 1512 | 0 | 0 | 21 | |
| SPA027292 | 3A (P3-A) | 1415 | 1491 | 0 | 0 | 77 | |
| SPA027293 | 2C (P2-C) | 1093 | 1414 | 0 | 0 | 322 | |
| SPA027294 | 2B (P2-B) | 998 | 1092 | 0 | 0 | 95 | |
| SPA027295 | 2A (P2-A) | 856 | 997 | 0 | 0 | 142 | |
| SPA027296 | 1D (VP1) | 574 | 855 | 0 | 0 | 282 | |
| SPA027297 | 1C (VP3) | 336 | 573 | 0 | 0 | 238 | |
| SPA027298 | 1B (VP2) | 70 | 335 | 0 | 0 | 266 | |
| SPA027299 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA027300 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA027301 | CDS | 1 | 2155 | 0 | 0 | 2155 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |