| RVdb StrainID | ANP00097 | GenBank Accession | OM001464.1 |
| Species | RVA | Sequence Length | 7082 nt |
| Serotype | 11 Checked by RVdb | Serotype (GenBank) | 11 |
| Definition | Rhinovirus A11 strain RvA11/USA/2021/X97RTD, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA11/USA/2021/X97RTD | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 39767 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA015994 | 1A (VP4) | 596 | 802 | 0 | 0 | 207 | |
| SQA015995 | 1B (VP2) | 803 | 1582 | 0 | 0 | 780 | |
| SQA015996 | 1C (VP3) | 1583 | 2296 | 0 | 0 | 714 | |
| SQA015997 | 1D (VP1) | 2297 | 3154 | 0 | 0 | 858 | |
| SQA015998 | 2A (P2-A) | 3155 | 3580 | 0 | 0 | 426 | |
| SQA015999 | 2B (P2-B) | 3581 | 3865 | 0 | 0 | 285 | |
| SQA016000 | 2C (P2-C) | 3866 | 4831 | 0 | 0 | 966 | |
| SQA016001 | 3'UTR | 7058 | 7082 | 0 | 1 | 25 | |
| SQA016002 | 3A (P3-A) | 4832 | 5062 | 0 | 0 | 231 | |
| SQA016003 | 3B (VPg) | 5063 | 5125 | 0 | 0 | 63 | |
| SQA016004 | protease 3C | 5126 | 5674 | 0 | 0 | 549 | |
| SQA016005 | 3D | 5675 | 7054 | 0 | 0 | 1380 | |
| SQA016006 | 5'UTR | 1 | 595 | 1 | 0 | 595 | |
| SQA016007 | CDS | 596 | 7057 | 0 | 0 | 6462 | |
| SQA016008 | VP4/2 | 596 | 1030 | 0 | 0 | 435 | |
| SQA016009 | genome | 1 | 7082 | 1 | 1 | 7082 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA027484 | protease 3C | 1511 | 1693 | 0 | 0 | 183 | |
| SPA027485 | 3D | 1694 | 2153 | 0 | 0 | 460 | |
| SPA027486 | 3B (VPg) | 1490 | 1510 | 0 | 0 | 21 | |
| SPA027487 | 3A (P3-A) | 1413 | 1489 | 0 | 0 | 77 | |
| SPA027488 | 2C (P2-C) | 1091 | 1412 | 0 | 0 | 322 | |
| SPA027489 | 2B (P2-B) | 996 | 1090 | 0 | 0 | 95 | |
| SPA027490 | 2A (P2-A) | 854 | 995 | 0 | 0 | 142 | |
| SPA027491 | 1D (VP1) | 568 | 853 | 0 | 0 | 286 | |
| SPA027492 | 1C (VP3) | 330 | 567 | 0 | 0 | 238 | |
| SPA027493 | 1B (VP2) | 70 | 329 | 0 | 0 | 260 | |
| SPA027494 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA027495 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA027496 | CDS | 1 | 2153 | 0 | 0 | 2153 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |