| RVdb StrainID | ANP00012 | GenBank Accession | ON729337.1 |
| Species | RVA | Sequence Length | 6955 nt |
| Serotype | 29 Checked by RVdb | Serotype (GenBank) | 29 |
| Definition | Rhinovirus A29 strain SC815 polyprotein gene, partial cds | GenBank Submission Date | 2022-07-20 |
| Strain Name | SC815 | Sampling Date | 2017 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 44129 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA015727 | 1A (VP4) | 535 | 741 | 0 | 0 | 207 | |
| SQA015728 | 1B (VP2) | 742 | 1539 | 0 | 0 | 798 | |
| SQA015729 | 1C (VP3) | 1540 | 2253 | 0 | 0 | 714 | |
| SQA015730 | 1D (VP1) | 2254 | 3096 | 0 | 0 | 843 | |
| SQA015731 | 2A (P2-A) | 3097 | 3522 | 0 | 0 | 426 | |
| SQA015732 | 2B (P2-B) | 3523 | 3807 | 0 | 0 | 285 | |
| SQA015733 | 2C (P2-C) | 3808 | 4773 | 0 | 0 | 966 | |
| SQA015734 | 3A (P3-A) | 4774 | 5004 | 0 | 0 | 231 | |
| SQA015735 | 3B (VPg) | 5005 | 5067 | 0 | 0 | 63 | |
| SQA015736 | protease 3C | 5068 | 5616 | 0 | 0 | 549 | |
| SQA015737 | 3D | 5617 | 6955 | 0 | 1 | 1339 | |
| SQA015738 | 5'UTR | 1 | 534 | 1 | 0 | 534 | |
| SQA015739 | CDS | 535 | 6955 | 0 | 1 | 6421 | |
| SQA015740 | VP4/2 | 535 | 969 | 0 | 0 | 435 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA030473 | protease 3C | 1512 | 1694 | 0 | 0 | 183 | |
| SPA030474 | 3D | 1695 | 2140 | 0 | 1 | 446 | |
| SPA030475 | 3B (VPg) | 1491 | 1511 | 0 | 0 | 21 | |
| SPA030476 | 3A (P3-A) | 1414 | 1490 | 0 | 0 | 77 | |
| SPA030477 | 2C (P2-C) | 1092 | 1413 | 0 | 0 | 322 | |
| SPA030478 | 2B (P2-B) | 997 | 1091 | 0 | 0 | 95 | |
| SPA030479 | 2A (P2-A) | 855 | 996 | 0 | 0 | 142 | |
| SPA030480 | 1D (VP1) | 574 | 854 | 0 | 0 | 281 | |
| SPA030481 | 1C (VP3) | 334 | 573 | 0 | 0 | 240 | |
| SPA030482 | 1B (VP2) | 70 | 333 | 0 | 0 | 264 | |
| SPA030483 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA030484 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA030485 | CDS | 1 | 2140 | 0 | 0 | 2140 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |