RVdb StrainID | ANP00002 | GenBank Accession | X02316.1 |
Species | RVA | Sequence Length | 7102 nt |
Serotype | 2 Checked by RVdb | Serotype (GenBank) | 2 |
Definition | Human rhinovirus 2, complete sequence | GenBank Submission Date | 2006-11-14 |
Strain Name | -N/A- | Sampling Date | -N/A- |
Sampling Country | -N/A- | Sampling location | -N/A- |
Isolation Source | -N/A- | NCBI Taxon ID | 12130 |
Sequencing Technology | -N/A- | Assembly Method | -N/A- |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA015699 | 1A (VP4) | 611 | 817 | 0 | 0 | 207 | |
SQA015700 | 1B (VP2) | 818 | 1600 | 0 | 0 | 783 | |
SQA015701 | 1C (VP3) | 1601 | 2311 | 0 | 0 | 711 | |
SQA015702 | 1D (VP1) | 2312 | 3160 | 0 | 0 | 849 | |
SQA015703 | 2A (P2-A) | 3161 | 3586 | 0 | 0 | 426 | |
SQA015704 | 2B (P2-B) | 3587 | 3871 | 0 | 0 | 285 | |
SQA015705 | 2C (P2-C) | 3872 | 4837 | 0 | 0 | 966 | |
SQA015706 | 3'UTR | 7064 | 7102 | 0 | 0 | 39 | |
SQA015707 | 3A (P3-A) | 4838 | 5068 | 0 | 0 | 231 | |
SQA015708 | 3B (VPg) | 5069 | 5131 | 0 | 0 | 63 | |
SQA015709 | protease 3C | 5132 | 5680 | 0 | 0 | 549 | |
SQA015710 | 3D | 5681 | 7060 | 0 | 0 | 1380 | |
SQA015711 | 5'UTR | 1 | 610 | 0 | 0 | 610 | |
SQA015712 | CDS | 611 | 7063 | 0 | 0 | 6453 | |
SQA015713 | VP4/2 | 611 | 1045 | 0 | 0 | 435 | |
SQA015714 | genome | 1 | 7102 | 0 | 0 | 7102 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA014526 | protease 3C | 1508 | 1690 | 0 | 0 | 183 | |
SPA014527 | 3D | 1691 | 2150 | 0 | 0 | 460 | |
SPA014528 | 3B (VPg) | 1487 | 1507 | 0 | 0 | 21 | |
SPA014529 | 3A (P3-A) | 1410 | 1486 | 0 | 0 | 77 | |
SPA014530 | 2C (P2-C) | 1088 | 1409 | 0 | 0 | 322 | |
SPA014531 | 2B (P2-B) | 993 | 1087 | 0 | 0 | 95 | |
SPA014532 | 2A (P2-A) | 851 | 992 | 0 | 0 | 142 | |
SPA014533 | 1D (VP1) | 568 | 850 | 0 | 0 | 283 | |
SPA014534 | 1C (VP3) | 331 | 567 | 0 | 0 | 237 | |
SPA014535 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
SPA014536 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA014537 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
SPA014538 | CDS | 1 | 2150 | 0 | 0 | 2150 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
2987843 | Human rhinovirus 2: complete nucleotide sequence and proteolytic processing signals in the capsid protein region. | 1985 | Nucleic Acids Res | View More |