| RVdb StrainID | ANM08350 | GenBank Accession | AY751783.1 |
| Species | RVA | Sequence Length | 7137 nt |
| Serotype | 39 Checked by RVdb | Serotype (GenBank) | 39 |
| Definition | Human rhinovirus 39, complete genome | GenBank Submission Date | 2005-04-12 |
| Strain Name | -N/A- | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185907 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA015162 | 1A (VP4) | 615 | 821 | 0 | 0 | 207 | |
| SQA015163 | 1B (VP2) | 822 | 1616 | 0 | 0 | 795 | |
| SQA015164 | 1C (VP3) | 1617 | 2330 | 0 | 0 | 714 | |
| SQA015165 | 1D (VP1) | 2331 | 3185 | 0 | 0 | 855 | |
| SQA015166 | 2A (P2-A) | 3186 | 3611 | 0 | 0 | 426 | |
| SQA015167 | 2B (P2-B) | 3612 | 3896 | 0 | 0 | 285 | |
| SQA015168 | 2C (P2-C) | 3897 | 4862 | 0 | 0 | 966 | |
| SQA015169 | 3'UTR | 7089 | 7137 | 0 | 0 | 49 | |
| SQA015170 | 3A (P3-A) | 4863 | 5093 | 0 | 0 | 231 | |
| SQA015171 | 3B (VPg) | 5094 | 5156 | 0 | 0 | 63 | |
| SQA015172 | protease 3C | 5157 | 5705 | 0 | 0 | 549 | |
| SQA015173 | 3D | 5706 | 7085 | 0 | 0 | 1380 | |
| SQA015174 | 5'UTR | 1 | 614 | 0 | 0 | 614 | |
| SQA015175 | CDS | 615 | 7088 | 0 | 0 | 6474 | |
| SQA015176 | VP4/2 | 615 | 1049 | 0 | 0 | 435 | |
| SQA015177 | genome | 1 | 7137 | 0 | 0 | 7137 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA000516 | protease 3C | 1515 | 1697 | 0 | 0 | 183 | |
| SPA000517 | 3D | 1698 | 2153 | 0 | 0 | 456 | |
| SPA000518 | 3B (VPg) | 1494 | 1514 | 0 | 0 | 21 | |
| SPA000519 | 3A (P3-A) | 1417 | 1493 | 0 | 0 | 77 | |
| SPA000520 | 2C (P2-C) | 1095 | 1416 | 0 | 0 | 322 | |
| SPA000521 | 2B (P2-B) | 1000 | 1094 | 0 | 0 | 95 | |
| SPA000522 | 2A (P2-A) | 858 | 999 | 0 | 0 | 142 | |
| SPA000523 | 1D (VP1) | 573 | 857 | 0 | 0 | 285 | |
| SPA000524 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA000525 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA000526 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA000527 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA000528 | CDS | 1 | 2157 | 0 | 0 | 2157 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 15827151 | Amino acid changes in proteins 2B and 3A mediate rhinovirus type 39 growth in mouse cells. | 2005 | J Virol | View More |