| RVdb StrainID | ANM08335 | GenBank Accession | DQ473500.1 |
| Species | RVA | Sequence Length | 7135 nt |
| Serotype | 59 Checked by RVdb | Serotype (GenBank) | 59 |
| Definition | Rhinovirus A59, complete genome | GenBank Submission Date | 2022-01-24 |
| Strain Name | -N/A- | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185918 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA015129 | 1A (VP4) | 612 | 818 | 0 | 0 | 207 | |
| SQA015130 | 1B (VP2) | 819 | 1613 | 0 | 0 | 795 | |
| SQA015131 | 1C (VP3) | 1614 | 2327 | 0 | 0 | 714 | |
| SQA015132 | 1D (VP1) | 2328 | 3185 | 0 | 0 | 858 | |
| SQA015133 | 2A (P2-A) | 3186 | 3611 | 0 | 0 | 426 | |
| SQA015134 | 2B (P2-B) | 3612 | 3896 | 0 | 0 | 285 | |
| SQA015135 | 2C (P2-C) | 3897 | 4862 | 0 | 0 | 966 | |
| SQA015136 | 3'UTR | 7089 | 7135 | 0 | 0 | 47 | |
| SQA015137 | 3A (P3-A) | 4863 | 5093 | 0 | 0 | 231 | |
| SQA015138 | 3B (VPg) | 5094 | 5156 | 0 | 0 | 63 | |
| SQA015139 | protease 3C | 5157 | 5705 | 0 | 0 | 549 | |
| SQA015140 | 3D | 5706 | 7085 | 0 | 0 | 1380 | |
| SQA015141 | 5'UTR | 1 | 611 | 0 | 0 | 611 | |
| SQA015142 | CDS | 612 | 7088 | 0 | 0 | 6477 | |
| SQA015143 | VP4/2 | 612 | 1046 | 0 | 0 | 435 | |
| SQA015144 | genome | 1 | 7135 | 0 | 0 | 7135 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA000646 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA000647 | 3D | 1699 | 2158 | 0 | 0 | 460 | |
| SPA000648 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA000649 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA000650 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA000651 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA000652 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA000653 | 1D (VP1) | 573 | 858 | 0 | 0 | 286 | |
| SPA000654 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA000655 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA000656 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA000657 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA000658 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 17477878 | Genome-wide diversity and selective pressure in the human rhinovirus. | 2007 | Virol J | View More |