| RVdb StrainID | ANM06195 | GenBank Accession | KF958307.1 |
| Species | RVA | Sequence Length | 7141 nt |
| Serotype | 36 Checked by RVdb | Serotype (GenBank) | 36 |
| Definition | Rhinovirus A isolate 2916, complete genome | GenBank Submission Date | 2015-11-17 |
| Strain Name | 2916 | Sampling Date | 1999-04-17 |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147711 |
| Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAStar SeqMan Pro v. 9.1 |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA013540 | 1A (VP4) | 617 | 823 | 0 | 0 | 207 | |
| SQA013541 | 1B (VP2) | 824 | 1624 | 0 | 0 | 801 | |
| SQA013542 | 1C (VP3) | 1625 | 2338 | 0 | 0 | 714 | |
| SQA013543 | 1D (VP1) | 2339 | 3205 | 0 | 0 | 867 | |
| SQA013544 | 2A (P2-A) | 3206 | 3631 | 0 | 0 | 426 | |
| SQA013545 | 2B (P2-B) | 3632 | 3916 | 0 | 0 | 285 | |
| SQA013546 | 2C (P2-C) | 3917 | 4879 | 0 | 0 | 963 | |
| SQA013547 | 3'UTR | 7103 | 7141 | 0 | 0 | 39 | |
| SQA013548 | 3A (P3-A) | 4880 | 5107 | 0 | 0 | 228 | |
| SQA013549 | 3B (VPg) | 5108 | 5170 | 0 | 0 | 63 | |
| SQA013550 | protease 3C | 5171 | 5719 | 0 | 0 | 549 | |
| SQA013551 | 3D | 5720 | 7099 | 0 | 0 | 1380 | |
| SQA013552 | 5'UTR | 1 | 616 | 0 | 0 | 616 | |
| SQA013553 | CDS | 617 | 7102 | 0 | 0 | 6486 | |
| SQA013554 | VP4/2 | 617 | 1051 | 0 | 0 | 435 | |
| SQA013555 | genome | 1 | 7141 | 0 | 0 | 7141 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA006372 | protease 3C | 1519 | 1701 | 0 | 0 | 183 | |
| SPA006373 | 3D | 1702 | 2161 | 0 | 0 | 460 | |
| SPA006374 | 3B (VPg) | 1498 | 1518 | 0 | 0 | 21 | |
| SPA006375 | 3A (P3-A) | 1422 | 1497 | 0 | 0 | 76 | |
| SPA006376 | 2C (P2-C) | 1101 | 1421 | 0 | 0 | 321 | |
| SPA006377 | 2B (P2-B) | 1006 | 1100 | 0 | 0 | 95 | |
| SPA006378 | 2A (P2-A) | 864 | 1005 | 0 | 0 | 142 | |
| SPA006379 | 1D (VP1) | 575 | 863 | 0 | 0 | 289 | |
| SPA006380 | 1C (VP3) | 337 | 574 | 0 | 0 | 238 | |
| SPA006381 | 1B (VP2) | 70 | 336 | 0 | 0 | 267 | |
| SPA006382 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA006383 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA006384 | CDS | 1 | 2161 | 0 | 0 | 2161 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 24636084 | Effects of rhinovirus species on viral replication and cytokine production. | 2014 | J Allergy Clin Immunol | View More |