RVdb StrainID | ANM05090 | GenBank Accession | KR059993.1 |
Species | RVA | Sequence Length | 396 nt |
Serotype | 56 | Serotype (GenBank) | 56 |
Definition | Rhinovirus A isolate KENHRV005 polyprotein gene, partial cds | GenBank Submission Date | 2016-05-12 |
Strain Name | KENHRV005 | Sampling Date | 2008-02-07 |
Sampling Country | Kenya | Sampling location | Nairobi |
Isolation Source | nasopharyngeal | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAbaser v. version 4.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA012968 | 1A (VP4) | 31 | 237 | 0 | 0 | 207 | |
SQA012969 | 5'UTR | 1 | 30 | 1 | 0 | 30 | |
SQA012970 | CDS | 31 | 396 | 0 | 1 | 366 | |
SQA012971 | VP4/2 | 31 | 396 | 0 | 1 | 366 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA008286 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA008287 | VP4/2 | 1 | 122 | 0 | 1 | 122 | |
SPA008288 | CDS | 1 | 122 | 0 | 0 | 122 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26822469 | Serotype and genetic diversity of human rhinovirus strains that circulated in Kenya in 2008. | 2016 | Influenza Other Respir Viruses | View More |