RVdb StrainID | ANM05085 | GenBank Accession | KR059998.1 |
Species | RVA | Sequence Length | 507 nt |
Serotype | 1 | Serotype (GenBank) | 1 |
Definition | Rhinovirus A isolate KENHRV012 polyprotein gene, partial cds | GenBank Submission Date | 2016-05-12 |
Strain Name | KENHRV012 | Sampling Date | 2008-03-11 |
Sampling Country | Kenya | Sampling location | Nairobi |
Isolation Source | nasopharyngeal | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAbaser v. version 4.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA012964 | 1A (VP4) | 91 | 297 | 0 | 0 | 207 | |
SQA012965 | 5'UTR | 1 | 90 | 1 | 0 | 90 | |
SQA012966 | CDS | 91 | 507 | 0 | 1 | 417 | |
SQA012967 | VP4/2 | 91 | 507 | 0 | 1 | 417 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA008301 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA008302 | VP4/2 | 1 | 139 | 0 | 1 | 139 | |
SPA008303 | CDS | 1 | 139 | 0 | 0 | 139 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26822469 | Serotype and genetic diversity of human rhinovirus strains that circulated in Kenya in 2008. | 2016 | Influenza Other Respir Viruses | View More |