| RVdb StrainID | ANM00485 | GenBank Accession | OK181462.1 |
| Species | RVA | Sequence Length | 7105 nt |
| Serotype | 46 Checked by RVdb | Serotype (GenBank) | 46 |
| Definition | Rhinovirus A46 strain RvA46/USA/2021/9QUT2Q, complete genome | GenBank Submission Date | 2022-05-06 |
| Strain Name | RvA46/USA/2021/9QUT2Q | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 167324 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA009306 | 1A (VP4) | 575 | 781 | 0 | 0 | 207 | |
| SQA009307 | 1B (VP2) | 782 | 1573 | 0 | 0 | 792 | |
| SQA009308 | 1C (VP3) | 1574 | 2287 | 0 | 0 | 714 | |
| SQA009309 | 1D (VP1) | 2288 | 3166 | 0 | 0 | 879 | |
| SQA009310 | 2A (P2-A) | 3167 | 3595 | 0 | 0 | 429 | |
| SQA009311 | 2B (P2-B) | 3596 | 3880 | 0 | 0 | 285 | |
| SQA009312 | 2C (P2-C) | 3881 | 4843 | 0 | 0 | 963 | |
| SQA009313 | 3'UTR | 7070 | 7105 | 0 | 1 | 36 | |
| SQA009314 | 3A (P3-A) | 4844 | 5077 | 0 | 0 | 234 | |
| SQA009315 | 3B (VPg) | 5078 | 5140 | 0 | 0 | 63 | |
| SQA009316 | protease 3C | 5141 | 5689 | 0 | 0 | 549 | |
| SQA009317 | 3D | 5690 | 7066 | 0 | 0 | 1377 | |
| SQA009318 | 5'UTR | 1 | 574 | 1 | 0 | 574 | |
| SQA009319 | CDS | 575 | 7069 | 0 | 0 | 6495 | |
| SQA009320 | VP4/2 | 575 | 1009 | 0 | 0 | 435 | |
| SQA009321 | genome | 1 | 7105 | 1 | 1 | 7105 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA022009 | protease 3C | 1523 | 1705 | 0 | 0 | 183 | |
| SPA022010 | 3D | 1706 | 2164 | 0 | 0 | 459 | |
| SPA022011 | 3B (VPg) | 1502 | 1522 | 0 | 0 | 21 | |
| SPA022012 | 3A (P3-A) | 1424 | 1501 | 0 | 0 | 78 | |
| SPA022013 | 2C (P2-C) | 1103 | 1423 | 0 | 0 | 321 | |
| SPA022014 | 2B (P2-B) | 1008 | 1102 | 0 | 0 | 95 | |
| SPA022015 | 2A (P2-A) | 865 | 1007 | 0 | 0 | 143 | |
| SPA022016 | 1D (VP1) | 572 | 864 | 0 | 0 | 293 | |
| SPA022017 | 1C (VP3) | 334 | 571 | 0 | 0 | 238 | |
| SPA022018 | 1B (VP2) | 70 | 333 | 0 | 0 | 264 | |
| SPA022019 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA022020 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA022021 | CDS | 1 | 2164 | 0 | 0 | 2164 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |