| RVdb StrainID | ANM00440 | GenBank Accession | OK254835.1 |
| Species | RVA | Sequence Length | 7124 nt |
| Serotype | 31 Checked by RVdb | Serotype (GenBank) | 31 |
| Definition | Rhinovirus A31 strain RvA31/USA/2021/7SD656, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA31/USA/2021/7SD656 | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185902 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA009162 | 1A (VP4) | 599 | 805 | 0 | 0 | 207 | |
| SQA009163 | 1B (VP2) | 806 | 1606 | 0 | 0 | 801 | |
| SQA009164 | 1C (VP3) | 1607 | 2320 | 0 | 0 | 714 | |
| SQA009165 | 1D (VP1) | 2321 | 3175 | 0 | 0 | 855 | |
| SQA009166 | 2A (P2-A) | 3176 | 3601 | 0 | 0 | 426 | |
| SQA009167 | 2B (P2-B) | 3602 | 3886 | 0 | 0 | 285 | |
| SQA009168 | 2C (P2-C) | 3887 | 4852 | 0 | 0 | 966 | |
| SQA009169 | 3'UTR | 7079 | 7124 | 0 | 0 | 46 | |
| SQA009170 | 3A (P3-A) | 4853 | 5083 | 0 | 0 | 231 | |
| SQA009171 | 3B (VPg) | 5084 | 5146 | 0 | 0 | 63 | |
| SQA009172 | protease 3C | 5147 | 5695 | 0 | 0 | 549 | |
| SQA009173 | 3D | 5696 | 7075 | 0 | 0 | 1380 | |
| SQA009174 | 5'UTR | 1 | 598 | 1 | 0 | 598 | |
| SQA009175 | CDS | 599 | 7078 | 0 | 0 | 6480 | |
| SQA009176 | VP4/2 | 599 | 1033 | 0 | 0 | 435 | |
| SQA009177 | genome | 1 | 7124 | 1 | 0 | 7124 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA023285 | protease 3C | 1517 | 1699 | 0 | 0 | 183 | |
| SPA023286 | 3D | 1700 | 2159 | 0 | 0 | 460 | |
| SPA023287 | 3B (VPg) | 1496 | 1516 | 0 | 0 | 21 | |
| SPA023288 | 3A (P3-A) | 1419 | 1495 | 0 | 0 | 77 | |
| SPA023289 | 2C (P2-C) | 1097 | 1418 | 0 | 0 | 322 | |
| SPA023290 | 2B (P2-B) | 1002 | 1096 | 0 | 0 | 95 | |
| SPA023291 | 2A (P2-A) | 860 | 1001 | 0 | 0 | 142 | |
| SPA023292 | 1D (VP1) | 575 | 859 | 0 | 0 | 285 | |
| SPA023293 | 1C (VP3) | 335 | 574 | 0 | 0 | 240 | |
| SPA023294 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA023295 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA023296 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA023297 | CDS | 1 | 2159 | 0 | 0 | 2159 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |