RVdb StrainID ANM00425 GenBank Accession OK254859.1
Species RVA Sequence Length 7045 nt
Serotype Corrected by RVdb Serotype (GenBank) 1B
Definition Rhinovirus A1B strain RvA1B/USA/2021/H23QU5, complete genome GenBank Submission Date 2022-05-06
Strain Name RvA1B/USA/2021/H23QU5 Sampling Date 2021
Sampling Country USA Sampling location Seattle, Washington
Isolation Source -N/A- NCBI Taxon ID 2777147
Sequencing Technology -N/A- Assembly Method -N/A-

Download selected NT sequences
SeqID Gene Name Start End StartTruncated EndTruncated Length
SQA009114 1A (VP4) 536 742 0 0 207
SQA009115 1B (VP2) 743 1531 0 0 789
SQA009116 1C (VP3) 1532 2242 0 0 711
SQA009117 1D (VP1) 2243 3103 0 0 861
SQA009118 2A (P2-A) 3104 3529 0 0 426
SQA009119 2B (P2-B) 3530 3814 0 0 285
SQA009120 2C (P2-C) 3815 4780 0 0 966
SQA009121 3'UTR 7007 7043 0 0 37
SQA009122 3A (P3-A) 4781 5011 0 0 231
SQA009123 3B (VPg) 5012 5074 0 0 63
SQA009124 protease 3C 5075 5623 0 0 549
SQA009125 3D 5624 7003 0 0 1380
SQA009126 5'UTR 1 535 1 0 535
SQA009127 CDS 536 7006 0 0 6471
SQA009128 VP4/2 536 970 0 0 435
SQA009129 genome 1 7045 1 0 7045
Download selected AA sequences
SeqID Gene Name Start End StartTruncated EndTruncated Length
SPA023480 protease 3C 1514 1696 0 0 183
SPA023481 3D 1697 2152 0 0 456
SPA023482 3B (VPg) 1493 1513 0 0 21
SPA023483 3A (P3-A) 1416 1492 0 0 77
SPA023484 2C (P2-C) 1094 1415 0 0 322
SPA023485 2B (P2-B) 999 1093 0 0 95
SPA023486 2A (P2-A) 857 998 0 0 142
SPA023487 1D (VP1) 570 856 0 0 287
SPA023488 1C (VP3) 333 569 0 0 237
SPA023489 1B (VP2) 70 332 0 0 263
SPA023490 1A (VP4) 1 69 0 0 69
SPA023491 VP4/2 1 145 0 0 145
SPA023492 CDS 1 2156 0 0 2156
PMID Title Publication Year Journal View in RVdb
35749582 The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. 2022 J Infect Dis View More