| RVdb StrainID | ANM00415 | GenBank Accession | OK254870.1 |
| Species | RVA | Sequence Length | 7073 nt |
| Serotype | 11 Checked by RVdb | Serotype (GenBank) | 11 |
| Definition | Rhinovirus A11 strain RvA11/USA/2021/PLXFU8, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA11/USA/2021/PLXFU8 | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 39767 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA009082 | 1A (VP4) | 587 | 793 | 0 | 0 | 207 | |
| SQA009083 | 1B (VP2) | 794 | 1573 | 0 | 0 | 780 | |
| SQA009084 | 1C (VP3) | 1574 | 2287 | 0 | 0 | 714 | |
| SQA009085 | 1D (VP1) | 2288 | 3145 | 0 | 0 | 858 | |
| SQA009086 | 2A (P2-A) | 3146 | 3571 | 0 | 0 | 426 | |
| SQA009087 | 2B (P2-B) | 3572 | 3856 | 0 | 0 | 285 | |
| SQA009088 | 2C (P2-C) | 3857 | 4822 | 0 | 0 | 966 | |
| SQA009089 | 3'UTR | 7049 | 7073 | 0 | 1 | 25 | |
| SQA009090 | 3A (P3-A) | 4823 | 5053 | 0 | 0 | 231 | |
| SQA009091 | 3B (VPg) | 5054 | 5116 | 0 | 0 | 63 | |
| SQA009092 | protease 3C | 5117 | 5665 | 0 | 0 | 549 | |
| SQA009093 | 3D | 5666 | 7045 | 0 | 0 | 1380 | |
| SQA009094 | 5'UTR | 1 | 586 | 1 | 0 | 586 | |
| SQA009095 | CDS | 587 | 7048 | 0 | 0 | 6462 | |
| SQA009096 | VP4/2 | 587 | 1021 | 0 | 0 | 435 | |
| SQA009097 | genome | 1 | 7073 | 1 | 1 | 7073 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA023610 | protease 3C | 1511 | 1693 | 0 | 0 | 183 | |
| SPA023611 | 3D | 1694 | 2153 | 0 | 0 | 460 | |
| SPA023612 | 3B (VPg) | 1490 | 1510 | 0 | 0 | 21 | |
| SPA023613 | 3A (P3-A) | 1413 | 1489 | 0 | 0 | 77 | |
| SPA023614 | 2C (P2-C) | 1091 | 1412 | 0 | 0 | 322 | |
| SPA023615 | 2B (P2-B) | 996 | 1090 | 0 | 0 | 95 | |
| SPA023616 | 2A (P2-A) | 854 | 995 | 0 | 0 | 142 | |
| SPA023617 | 1D (VP1) | 568 | 853 | 0 | 0 | 286 | |
| SPA023618 | 1C (VP3) | 330 | 567 | 0 | 0 | 238 | |
| SPA023619 | 1B (VP2) | 70 | 329 | 0 | 0 | 260 | |
| SPA023620 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA023621 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA023622 | CDS | 1 | 2153 | 0 | 0 | 2153 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |