| RVdb StrainID | ANM00390 | GenBank Accession | OK539473.1 |
| Species | RVA | Sequence Length | 7075 nt |
| Serotype | 101 Checked by RVdb | Serotype (GenBank) | 101 |
| Definition | Rhinovirus A101 strain RvA101/USA/2021/AABEL2, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA101/USA/2021/AABEL2 | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 1219381 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA009002 | 1A (VP4) | 577 | 783 | 0 | 0 | 207 | |
| SQA009003 | 1B (VP2) | 784 | 1549 | 0 | 0 | 766 | |
| SQA009004 | 1C (VP3) | 1550 | 2283 | 0 | 0 | 734 | |
| SQA009005 | 1D (VP1) | 2284 | 3150 | 0 | 0 | 867 | |
| SQA009006 | 2A (P2-A) | 3151 | 3579 | 0 | 0 | 429 | |
| SQA009007 | 2B (P2-B) | 3580 | 3864 | 0 | 0 | 285 | |
| SQA009008 | 2C (P2-C) | 3865 | 4827 | 0 | 0 | 963 | |
| SQA009009 | 3'UTR | 7054 | 7075 | 0 | 1 | 22 | |
| SQA009010 | 3A (P3-A) | 4828 | 5061 | 0 | 0 | 234 | |
| SQA009011 | 3B (VPg) | 5062 | 5124 | 0 | 0 | 63 | |
| SQA009012 | protease 3C | 5125 | 5673 | 0 | 0 | 549 | |
| SQA009013 | 3D | 5674 | 7050 | 0 | 0 | 1377 | |
| SQA009014 | 5'UTR | 1 | 576 | 1 | 0 | 576 | |
| SQA009015 | CDS | 577 | 7053 | 0 | 0 | 6477 | |
| SQA009016 | VP4/2 | 577 | 1011 | 0 | 0 | 435 | |
| SQA009017 | genome | 1 | 7075 | 1 | 1 | 7075 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA024416 | protease 3C | 1517 | 1699 | 0 | 0 | 183 | |
| SPA024417 | 3D | 1700 | 2158 | 0 | 0 | 459 | |
| SPA024418 | 3B (VPg) | 1496 | 1516 | 0 | 0 | 21 | |
| SPA024419 | 3A (P3-A) | 1418 | 1495 | 0 | 0 | 78 | |
| SPA024420 | 2C (P2-C) | 1097 | 1417 | 0 | 0 | 321 | |
| SPA024421 | 2B (P2-B) | 1002 | 1096 | 0 | 0 | 95 | |
| SPA024422 | 2A (P2-A) | 859 | 1001 | 0 | 0 | 143 | |
| SPA024423 | 1D (VP1) | 570 | 858 | 0 | 0 | 289 | |
| SPA024424 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA024425 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA024426 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA024427 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA024428 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |